RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 NPHP1O15259 732 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 GCKRQ14397 625 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 KIAA1211Q6ZU35 1233 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 OVOS2A0A0G2JMS6 1433 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 HEG1Q9ULI3 1381 aa10.64□□□□□ -0.71
CALCOCO2-201ENST00000258947 MCCP23508 829 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 GORABQ5T7V8 394 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 ERC1Q8IUD2 1116 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 SSH3Q8TE77 659 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 DIAPH3Q9NSV4 1193 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 CWC25Q9NXE8 425 aaPredicted RBP10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 ERC2O15083 957 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 PDIA6Q15084 440 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 PLBD2Q8NHP8 589 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 TBC1D2BQ9UPU7 963 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 IGKV5-2P06315 115 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 LMBR1LQ6UX01 489 aa10.63□□□□□ -0.71
CALCOCO2-201ENST00000258947 TEX13AQ9BXU3 409 aaPredicted RBP10.62□□□□□ -0.71
CALCOCO2-201ENST00000258947 ALS2Q96Q42 1657 aa10.62□□□□□ -0.71
CALCOCO2-201ENST00000258947 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
CALCOCO2-201ENST00000258947 CNTROBQ8N137 903 aa10.62□□□□□ -0.71
CALCOCO2-201ENST00000258947 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 NBPF14Q5TI25 921 aa10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 NBPF10Q6P3W6 841 aaKnown RBP10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 NBPF15Q8N660 670 aa10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 FAM182BQ5T319 152 aa10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 TBC1D2Q9BYX2 928 aa10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 IBTKQ9P2D0 1353 aaPredicted RBP10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 CWC27Q6UX04 472 aaKnown RBP10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 BOLA2Q9H3K6 86 aa10.61□□□□□ -0.71
CALCOCO2-201ENST00000258947 DNAJC2Q99543 621 aaKnown RBP10.6□□□□□ -0.71
CALCOCO2-201ENST00000258947 CCDC57Q2TAC2 916 aa10.6□□□□□ -0.71
CALCOCO2-201ENST00000258947 FAM89AQ96GI7 184 aa10.6□□□□□ -0.71
CALCOCO2-201ENST00000258947 ATG3Q9NT62 314 aa10.6□□□□□ -0.71
CALCOCO2-201ENST00000258947 FSD1Q9BTV5 496 aa10.6□□□□□ -0.71
CALCOCO2-201ENST00000258947 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 TRMT112Q9UI30 125 aaKnown RBP10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 PHRF1Q9P1Y6 1649 aaKnown RBP10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 ECHDC1Q9NTX5 307 aa10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 USP21Q9UK80 565 aa10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 KCNQ4P56696 695 aa10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 EPHA10Q5JZY3 1008 aa10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 ZBTB1Q9Y2K1 713 aa10.59□□□□□ -0.71
CALCOCO2-201ENST00000258947 USP54Q70EL1 1684 aa10.58□□□□□ -0.72
CALCOCO2-201ENST00000258947 ST18O60284 1047 aa10.58□□□□□ -0.72
CALCOCO2-201ENST00000258947 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
CALCOCO2-201ENST00000258947 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
CALCOCO2-201ENST00000258947 POLA2Q14181 598 aa10.57□□□□□ -0.72
CALCOCO2-201ENST00000258947 UNC5CLQ8IV45 518 aa10.57□□□□□ -0.72
CALCOCO2-201ENST00000258947 ZNF594Q96JF6 807 aaPredicted RBP10.57□□□□□ -0.72
CALCOCO2-201ENST00000258947 ERBB4Q15303 1308 aa10.57□□□□□ -0.72
CALCOCO2-201ENST00000258947 NEK4P51957 841 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 TFCP2Q12800 502 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 RUFY2Q8WXA3 655 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 SPATA31A1Q5TZJ5 1347 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 CNNM1Q9NRU3 951 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 KCNQ2O43526 872 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 CCDC191Q8NCU4 936 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 LMO7Q8WWI1 1683 aa10.56□□□□□ -0.72
CALCOCO2-201ENST00000258947 IFIT5Q13325 482 aaKnown RBP10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 EAF2Q96CJ1 260 aaPredicted RBP10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 ESYT1Q9BSJ8 1104 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 NDUFB9Q9Y6M9 179 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 ROBO1Q9Y6N7 1651 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 XIRP1Q702N8 1843 aaKnown RBP10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 LRRC37A3O60309 1634 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 CHMLP26374 656 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 HSP90AB3PQ58FF7 597 aa10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 MARCH10Q8NA82 808 aaPredicted RBP10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 UPF3BQ9BZI7 483 aaKnown RBP10.55□□□□□ -0.72
CALCOCO2-201ENST00000258947 LOC102724428A0A0B4J2F2 783 aa10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 SIK1P57059 783 aa10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 RABEP1Q15276 862 aa10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 TLR7Q9NYK1 1049 aaKnown RBP10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 FRAT2O75474 233 aaPredicted RBP10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 KAZALD1Q96I82 304 aa10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 FKBP4Q02790 459 aaKnown RBP eCLIP10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 HLFQ16534 295 aa10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 USP26Q9BXU7 913 aa10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 THRAP3Q9Y2W1 955 aaKnown RBP10.54□□□□□ -0.72
CALCOCO2-201ENST00000258947 SASH1O94885 1247 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 RBM25P49756 843 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 TIMM10P62072 90 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 FOXD4L5Q5VV16 416 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 FOXD4L4Q8WXT5 416 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 FGD1P98174 961 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 MTX1Q13505 466 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 METTL24Q5JXM2 366 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 LDHAL6AQ6ZMR3 332 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 SYNE4Q8N205 404 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 K7ELQ4 463 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms