RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 SMC3Q9UQE7 1217 aa20.38■□□□□ 0.85
CDK4-201ENST00000257904 STRCP1A6NGW2 1772 aa20.37■□□□□ 0.85
CDK4-201ENST00000257904 NBPF7P0C2Y1 421 aaPredicted RBP20.37■□□□□ 0.85
CDK4-201ENST00000257904 USP42Q9H9J4 1324 aaKnown RBP20.37■□□□□ 0.85
CDK4-201ENST00000257904 ATP6V1DQ9Y5K8 247 aa20.37■□□□□ 0.85
CDK4-201ENST00000257904 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
CDK4-201ENST00000257904 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
CDK4-201ENST00000257904 MTERF4Q7Z6M4 381 aaKnown RBP20.36■□□□□ 0.85
CDK4-201ENST00000257904 PIBF1Q8WXW3 757 aa20.36■□□□□ 0.85
CDK4-201ENST00000257904 ORAI2Q96SN7 254 aa20.36■□□□□ 0.85
CDK4-201ENST00000257904 ADCY5O95622 1261 aa20.36■□□□□ 0.85
CDK4-201ENST00000257904 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
CDK4-201ENST00000257904 SPG7Q9UQ90 795 aa20.36■□□□□ 0.85
CDK4-201ENST00000257904 HSP90AB4PQ58FF6 505 aa20.35■□□□□ 0.85
CDK4-201ENST00000257904 KLHL34Q8N239 644 aa20.35■□□□□ 0.85
CDK4-201ENST00000257904 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
CDK4-201ENST00000257904 TTC41PQ6P2S7 1318 aa20.35■□□□□ 0.85
CDK4-201ENST00000257904 CASTP20810 708 aaKnown RBP20.34■□□□□ 0.85
CDK4-201ENST00000257904 BEND3Q5T5X7 828 aa20.34■□□□□ 0.85
CDK4-201ENST00000257904 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
CDK4-201ENST00000257904 FIBPO43427 364 aa20.34■□□□□ 0.85
CDK4-201ENST00000257904 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.85
CDK4-201ENST00000257904 LARGE1O95461 756 aa20.33■□□□□ 0.85
CDK4-201ENST00000257904 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
CDK4-201ENST00000257904 ZNF830Q96NB3 372 aaPredicted RBP20.33■□□□□ 0.85
CDK4-201ENST00000257904 CEMIPQ8WUJ3 1361 aa20.33■□□□□ 0.84
CDK4-201ENST00000257904 CPA1P15085 419 aa20.33■□□□□ 0.84
CDK4-201ENST00000257904 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.84
CDK4-201ENST00000257904 MPNDQ8N594 471 aa20.33■□□□□ 0.84
CDK4-201ENST00000257904 MYRIPQ8NFW9 859 aa20.33■□□□□ 0.84
CDK4-201ENST00000257904 DNAAF4Q8WXU2 420 aa20.33■□□□□ 0.84
CDK4-201ENST00000257904 FUCA2Q9BTY2 467 aa20.33■□□□□ 0.84
CDK4-201ENST00000257904 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.84
CDK4-201ENST00000257904 C1orf167Q5SNV9 1468 aa20.32■□□□□ 0.84
CDK4-201ENST00000257904 KDM4AO75164 1064 aa20.32■□□□□ 0.84
CDK4-201ENST00000257904 NOLC1Q14978 699 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDK4-201ENST00000257904 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
CDK4-201ENST00000257904 EIF4A1P60842 406 aaKnown RBP20.31■□□□□ 0.84
CDK4-201ENST00000257904 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 DNTTIP2Q5QJE6 756 aaKnown RBP20.31■□□□□ 0.84
CDK4-201ENST00000257904 VPS53Q5VIR6 699 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 RUFY2Q8WXA3 655 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 TTC12Q9H892 705 aaPredicted RBP20.31■□□□□ 0.84
CDK4-201ENST00000257904 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 STRCQ7RTU9 1775 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 PI4KAP2A4QPH2 592 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 HOXB7P09629 217 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 GJB2P29033 226 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 CCDC83Q8IWF9 413 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 PI4KAP1Q8N8J0 262 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 LTN1O94822 1766 aa20.31■□□□□ 0.84
CDK4-201ENST00000257904 PRIMPOLQ96LW4 560 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 PDRG1Q9NUG6 133 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 PTH1RQ03431 593 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 GIMAP6Q6P9H5 292 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 USHBP1Q8N6Y0 703 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 KCNB2Q92953 911 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 ZSCAN31Q96LW9 406 aaPredicted RBP20.3■□□□□ 0.84
CDK4-201ENST00000257904 JAKMIP1Q96N16 626 aaKnown RBP20.3■□□□□ 0.84
CDK4-201ENST00000257904 TM6SF1Q9BZW5 370 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
CDK4-201ENST00000257904 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
CDK4-201ENST00000257904 DCCP43146 1447 aa20.29■□□□□ 0.84
CDK4-201ENST00000257904 ATF3P18847 181 aa20.29■□□□□ 0.84
CDK4-201ENST00000257904 DNM1Q05193 864 aaKnown RBP20.29■□□□□ 0.84
CDK4-201ENST00000257904 OS9Q13438 667 aaPredicted RBP20.29■□□□□ 0.84
CDK4-201ENST00000257904 MTX1Q13505 466 aa20.29■□□□□ 0.84
CDK4-201ENST00000257904 ADCK5Q3MIX3 580 aa20.29■□□□□ 0.84
CDK4-201ENST00000257904 ZBTB7CA1YPR0 619 aa20.28■□□□□ 0.84
CDK4-201ENST00000257904 PRPF40BQ6NWY9 871 aaKnown RBP20.28■□□□□ 0.84
CDK4-201ENST00000257904 CLASRPQ8N2M8 674 aaKnown RBP20.28■□□□□ 0.84
CDK4-201ENST00000257904 SPTLC3Q9NUV7 552 aa20.28■□□□□ 0.84
CDK4-201ENST00000257904 CYP46A1Q9Y6A2 500 aa20.28■□□□□ 0.84
CDK4-201ENST00000257904 ADCY9O60503 1353 aa20.28■□□□□ 0.84
CDK4-201ENST00000257904 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
CDK4-201ENST00000257904 KDM3BQ7LBC6 1761 aa20.28■□□□□ 0.84
CDK4-201ENST00000257904 NFAT5O94916 1531 aa20.27■□□□□ 0.84
CDK4-201ENST00000257904 HMGN5P82970 282 aaKnown RBP20.27■□□□□ 0.84
CDK4-201ENST00000257904 ECHDC1Q9NTX5 307 aa20.27■□□□□ 0.84
CDK4-201ENST00000257904 MST1RQ04912 1400 aa20.27■□□□□ 0.84
CDK4-201ENST00000257904 KIF1AQ12756 1690 aa20.27■□□□□ 0.83
CDK4-201ENST00000257904 ST3GAL1Q11201 340 aa20.26■□□□□ 0.83
CDK4-201ENST00000257904 KCNH5Q8NCM2 988 aa20.26■□□□□ 0.83
CDK4-201ENST00000257904 IP6K1Q92551 441 aa20.26■□□□□ 0.83
CDK4-201ENST00000257904 LMOD2Q6P5Q4 547 aa20.26■□□□□ 0.83
CDK4-201ENST00000257904 C17orf53Q8N3J3 647 aaPredicted RBP20.26■□□□□ 0.83
CDK4-201ENST00000257904 GTF2F1P35269 517 aaKnown RBP eCLIP20.25■□□□□ 0.834e-9■■■■■ 37.4
CDK4-201ENST00000257904 NECTIN1Q15223 517 aa20.25■□□□□ 0.83
CDK4-201ENST00000257904 GPATCH3Q96I76 525 aa20.25■□□□□ 0.83
CDK4-201ENST00000257904 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
CDK4-201ENST00000257904 ME3Q16798 604 aa20.25■□□□□ 0.83
CDK4-201ENST00000257904 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
CDK4-201ENST00000257904 VPS37CA5D8V6 355 aaPredicted RBP20.24■□□□□ 0.83
CDK4-201ENST00000257904 AP5Z1O43299 807 aa20.24■□□□□ 0.83
CDK4-201ENST00000257904 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
CDK4-201ENST00000257904 EVI5LQ96CN4 794 aa20.24■□□□□ 0.83
CDK4-201ENST00000257904 KCNQ3O43525 872 aa20.23■□□□□ 0.83
CDK4-201ENST00000257904 DTNBO60941 627 aa20.23■□□□□ 0.83
CDK4-201ENST00000257904 ANXA1P04083 346 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms