RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 PICK1Q9NRD5 415 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 PRXQ9BXM0 1461 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 BTG4Q9NY30 223 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 UHRF1BP1Q6BDS2 1440 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 TMOD4Q9NZQ9 345 aa16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 NOP2P46087 812 aaKnown RBP16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 SYCP3Q8IZU3 236 aa16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 CETN1Q12798 172 aa16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 BRDTQ58F21 947 aaPredicted RBP16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 ZNF397Q8NF99 534 aaPredicted RBP16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 CBFA2T2O43439 604 aa16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
ZC3H4-201ENST00000253048 TMPOP42166 694 aaKnown RBP16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 SSX2IPQ9Y2D8 614 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 UHRF1BP1LA0JNW5 1464 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 GOLGA8AA7E2F4 631 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 CCDC178Q5BJE1 867 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 TAF4BQ92750 862 aa16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 CCDC8Q9H0W5 538 aaPredicted RBP16.65■□□□□ 0.26
ZC3H4-201ENST00000253048 PSMD1Q99460 953 aa16.64■□□□□ 0.26
ZC3H4-201ENST00000253048 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.26
ZC3H4-201ENST00000253048 H0YHG0 523 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 H0YIN7 160 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 CFAP45Q9UL16 551 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 CCDC82Q8N4S0 544 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 GOLGA6L10A6NI86 522 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 KRT85P78386 507 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 ZMYND15Q9H091 742 aa16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 MRPS9P82933 396 aaKnown RBP16.64■□□□□ 0.25
ZC3H4-201ENST00000253048 FGFR1OPO95684 399 aaKnown RBP16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 CCDC117Q8IWD4 279 aaPredicted RBP16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 CALML4Q96GE6 196 aa16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 THUMPD2Q9BTF0 503 aaKnown RBP16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 IVNS1ABPQ9Y6Y0 642 aa16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 IL27Q8NEV9 243 aa16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 PUF60Q9UHX1 559 aaKnown RBP16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 FANCIQ9NVI1 1328 aa16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 TNMDQ9H2S6 317 aa16.63■□□□□ 0.25
ZC3H4-201ENST00000253048 HMGN5P82970 282 aaKnown RBP16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 FKBP15Q5T1M5 1219 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 FERMT1Q9BQL6 677 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 VPS36Q86VN1 386 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
ZC3H4-201ENST00000253048 PDE3AQ14432 1141 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 SUPT20HQ8NEM7 779 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 LRRC45Q96CN5 670 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 ANKRD2Q9GZV1 360 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 CASTP20810 708 aaKnown RBP16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 CCDC174Q6PII3 467 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 EP400NLQ6ZTU2 488 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 FAM98CQ17RN3 349 aaKnown RBP16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 LARGE2Q8N3Y3 721 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 STX8Q9UNK0 236 aa16.61■□□□□ 0.25
ZC3H4-201ENST00000253048 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 MBD3O95983 291 aa16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 HMGB1P09429 215 aaKnown RBP16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 CYP7A1P22680 504 aa16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 CTNNA2P26232 953 aa16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 WDR33Q9C0J8 1336 aaKnown RBP16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 PDE6BP35913 854 aa16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 KIF4AO95239 1232 aa16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 PLCG2P16885 1265 aa16.6■□□□□ 0.25
ZC3H4-201ENST00000253048 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 ANKRD13DQ6ZTN6 518 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 GOLIM4O00461 696 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 TBCAO75347 108 aaKnown RBP16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 SH2D4AQ9H788 454 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 NOS1P29475 1434 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 MX1P20591 662 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 CACNA2D4Q7Z3S7 1137 aa16.59■□□□□ 0.25
ZC3H4-201ENST00000253048 NAA16Q6N069 864 aaPredicted RBP16.58■□□□□ 0.25
ZC3H4-201ENST00000253048 ARHGAP27Q6ZUM4 889 aa16.58■□□□□ 0.25
ZC3H4-201ENST00000253048 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms