RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 PDE3AQ14432 1141 aa15.58■□□□□ 0.08
COLGALT1-201ENST00000252599 GOLGA5Q8TBA6 731 aa15.58■□□□□ 0.08
COLGALT1-201ENST00000252599 TRMT1Q9NXH9 659 aaKnown RBP15.58■□□□□ 0.08
COLGALT1-201ENST00000252599 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.58■□□□□ 0.08
COLGALT1-201ENST00000252599 TRAF1Q13077 416 aa15.58■□□□□ 0.08
COLGALT1-201ENST00000252599 ODF2LQ9ULJ1 636 aa15.58■□□□□ 0.08
COLGALT1-201ENST00000252599 PBRM1Q86U86 1689 aa15.58■□□□□ 0.08
COLGALT1-201ENST00000252599 ADGRL1O94910 1474 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 KIAA0754O94854 1291 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 PRKAR2BP31323 418 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 ZCCHC17Q9NP64 241 aaKnown RBP15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 DCTN1Q14203 1278 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 LRSAM1Q6UWE0 723 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 PTPN14Q15678 1187 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 HHATQ5VTY9 493 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 CCDC102AQ96A19 550 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 CD109Q6YHK3 1445 aa15.57■□□□□ 0.08
COLGALT1-201ENST00000252599 AMPHP49418 695 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 SSH1Q8WYL5 1049 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 ANKRD7Q92527 254 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 OAS2P29728 719 aaKnown RBP15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 MAP9Q49MG5 647 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 CEP135Q66GS9 1140 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 RUFY1Q96T51 708 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 CHMP3Q9Y3E7 222 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 UHRF1BP1Q6BDS2 1440 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 PAXBP1Q9Y5B6 917 aa15.56■□□□□ 0.08
COLGALT1-201ENST00000252599 FANCAO15360 1455 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 MTA1Q13330 715 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 SMARCE1Q969G3 411 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 ZNF215Q9UL58 517 aaPredicted RBP15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 NOS1P29475 1434 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 VPS18Q9P253 973 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 ERCC3P19447 782 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 TRIML1Q8N9V2 468 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 COG3Q96JB2 828 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 TRIM5Q9C035 493 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 PLEKHA4Q9H4M7 779 aa15.55■□□□□ 0.08
COLGALT1-201ENST00000252599 KLHL33A6NCF5 533 aa15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 GOLGA6L10A6NI86 522 aa15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 PHACTR2O75167 634 aa15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 SKAP2O75563 359 aaPredicted RBP15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 ZC3H12AQ5D1E8 599 aaKnown RBP15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 TMEM57Q8N5G2 664 aa15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 CAPN15O75808 1086 aa15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 FBXO18Q8NFZ0 1043 aa15.54■□□□□ 0.08
COLGALT1-201ENST00000252599 ELF1P32519 619 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 ST5P78524 1137 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 ARHGAP29Q52LW3 1261 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 KIAA0825Q8IV33 1275 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 KMT5BQ4FZB7 885 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 GNL3LQ9NVN8 582 aaKnown RBP15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 KDM5CP41229 1560 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 MBD3O95983 291 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 RPSAP08865 295 aaKnown RBP15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 FBXO38Q6PIJ6 1188 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
COLGALT1-201ENST00000252599 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 NUP160Q12769 1436 aa15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 CCDC189A1A4V9 331 aa15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 OATP04181 439 aa15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 SNX1Q13596 522 aa15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 ISM2Q6H9L7 571 aa15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 FAM107BQ9H098 131 aa15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
COLGALT1-201ENST00000252599 TPP2P29144 1249 aaPredicted RBP15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 C16orf87Q6PH81 154 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 TSHZ1Q6ZSZ6 1077 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 FILIP1Q7Z7B0 1213 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 FAM114A1Q8IWE2 563 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 TEX11Q8IYF3 940 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 MICAL1Q8TDZ2 1067 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 TRIM4Q9C037 500 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 EZRP15311 586 aaKnown RBP15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 ZNF445P59923 1031 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 CEP89Q96ST8 783 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 KIF9Q9HAQ2 790 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 MAGI2Q86UL8 1455 aa15.52■□□□□ 0.07
COLGALT1-201ENST00000252599 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 TMPOP42166 694 aaKnown RBP15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 MCM6Q14566 821 aa15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 RNF20Q5VTR2 975 aa15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 SMC3Q9UQE7 1217 aa15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 KDM2BQ8NHM5 1336 aa15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 KIRREL3Q8IZU9 778 aa15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 NOC3LQ8WTT2 800 aaKnown RBP15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 ZNF330Q9Y3S2 320 aaPredicted RBP15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 EMILIN1Q9Y6C2 1016 aa15.51■□□□□ 0.07
COLGALT1-201ENST00000252599 TRIM27P14373 513 aa15.5■□□□□ 0.07
COLGALT1-201ENST00000252599 UBAP1Q9NZ09 502 aa15.5■□□□□ 0.07
COLGALT1-201ENST00000252599 COL17A1Q9UMD9 1497 aaPredicted RBP15.5■□□□□ 0.07
COLGALT1-201ENST00000252599 ACTN2P35609 894 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms