RNA–Protein interactions for RNA: ENST00000249330.2

VGF-201, Transcript of VGF nerve growth factor inducible, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VGF, Length 2,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGF-201ENST00000249330 PHLPP1O60346 1717 aa24.57■■□□□ 1.52
VGF-201ENST00000249330 NKX1-1Q15270 411 aaPredicted RBP24.57■■□□□ 1.52
VGF-201ENST00000249330 ZSCAN23Q3MJ62 389 aa24.57■■□□□ 1.52
VGF-201ENST00000249330 COL16A1Q07092 1604 aaPredicted RBP24.56■■□□□ 1.52
VGF-201ENST00000249330 APBB1O00213 710 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 SRCIN1Q9C0H9 1055 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 UBAP1LF5GYI3 381 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 ST18O60284 1047 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 BEND3Q5T5X7 828 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 FMNL2Q96PY5 1086 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 DDX21Q9NR30 783 aaKnown RBP eCLIP24.56■■□□□ 1.52
VGF-201ENST00000249330 MAP3K2Q9Y2U5 619 aa24.56■■□□□ 1.52
VGF-201ENST00000249330 SNRPA1P09661 255 aaKnown RBP24.55■■□□□ 1.52
VGF-201ENST00000249330 COL22A1Q8NFW1 1626 aaPredicted RBP24.55■■□□□ 1.52
VGF-201ENST00000249330 OFD1O75665 1012 aa24.55■■□□□ 1.52
VGF-201ENST00000249330 GNAI3P08754 354 aa24.55■■□□□ 1.52
VGF-201ENST00000249330 C16orf71Q8IYS4 520 aaPredicted RBP24.55■■□□□ 1.52
VGF-201ENST00000249330 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.54■■□□□ 1.52
VGF-201ENST00000249330 HYPKQ9NX55 129 aa24.54■■□□□ 1.52
VGF-201ENST00000249330 LRRFIP2Q9Y608 721 aaKnown RBP24.54■■□□□ 1.52
VGF-201ENST00000249330 COL14A1Q05707 1796 aaKnown RBP24.54■■□□□ 1.52
VGF-201ENST00000249330 C5P01031 1676 aa24.54■■□□□ 1.52
VGF-201ENST00000249330 ERVV-2B6SEH9 535 aa24.54■■□□□ 1.52
VGF-201ENST00000249330 HS1BP3Q53T59 392 aa24.54■■□□□ 1.52
VGF-201ENST00000249330 SHANK3Q9BYB0 1731 aa24.53■■□□□ 1.52
VGF-201ENST00000249330 NBPF7P0C2Y1 421 aaPredicted RBP24.53■■□□□ 1.52
VGF-201ENST00000249330 PTCD1O75127 700 aaKnown RBP24.52■■□□□ 1.52
VGF-201ENST00000249330 KSR2Q6VAB6 950 aa24.52■■□□□ 1.52
VGF-201ENST00000249330 PNMA6EA0A0J9YXQ4 647 aa24.52■■□□□ 1.52
VGF-201ENST00000249330 PXDNLA1KZ92 1463 aa24.52■■□□□ 1.52
VGF-201ENST00000249330 UBTFL1P0CB47 393 aaPredicted RBP24.51■■□□□ 1.51
VGF-201ENST00000249330 SDSP20132 328 aa24.51■■□□□ 1.51
VGF-201ENST00000249330 PKP1Q13835 747 aa24.51■■□□□ 1.51
VGF-201ENST00000249330 SMARCA5O60264 1052 aaPredicted RBP24.5■■□□□ 1.51
VGF-201ENST00000249330 CWF19L2Q2TBE0 894 aaKnown RBP24.5■■□□□ 1.51
VGF-201ENST00000249330 OTUD7AQ8TE49 926 aaPredicted RBP24.5■■□□□ 1.51
VGF-201ENST00000249330 REC8O95072 547 aa24.5■■□□□ 1.51
VGF-201ENST00000249330 RBSNQ9H1K0 784 aa24.5■■□□□ 1.51
VGF-201ENST00000249330 PRPF40AO75400 957 aaKnown RBP24.49■■□□□ 1.51
VGF-201ENST00000249330 COPS6Q7L5N1 327 aa24.49■■□□□ 1.51
VGF-201ENST00000249330 XAGE3Q8WTP9 111 aa24.49■■□□□ 1.51
VGF-201ENST00000249330 ZGPATQ8N5A5 531 aaKnown RBP24.48■■□□□ 1.51
VGF-201ENST00000249330 ZMYND15Q9H091 742 aa24.48■■□□□ 1.51
VGF-201ENST00000249330 EXOC6BQ9Y2D4 811 aa24.48■■□□□ 1.51
VGF-201ENST00000249330 HMMRO75330 724 aa24.48■■□□□ 1.51
VGF-201ENST00000249330 PDCL3Q9H2J4 239 aa24.48■■□□□ 1.51
VGF-201ENST00000249330 TERF1P54274 439 aa24.47■■□□□ 1.51
VGF-201ENST00000249330 ATP8B2P98198 1209 aa24.47■■□□□ 1.51
VGF-201ENST00000249330 LRP10Q7Z4F1 713 aa24.47■■□□□ 1.51
VGF-201ENST00000249330 PRIM1P49642 420 aaKnown RBP24.47■■□□□ 1.51
VGF-201ENST00000249330 RIC3Q7Z5B4 369 aa24.47■■□□□ 1.51
VGF-201ENST00000249330 PDLIM2Q96JY6 352 aa24.47■■□□□ 1.51
VGF-201ENST00000249330 TMOD3Q9NYL9 352 aa24.47■■□□□ 1.51
VGF-201ENST00000249330 DISP2A7MBM2 1401 aa24.46■■□□□ 1.51
VGF-201ENST00000249330 NOL7Q9UMY1 257 aaKnown RBP24.46■■□□□ 1.51
VGF-201ENST00000249330 EXOC5O00471 708 aa24.46■■□□□ 1.51
VGF-201ENST00000249330 GPT2Q8TD30 523 aa24.46■■□□□ 1.51
VGF-201ENST00000249330 DDX58O95786 925 aaKnown RBP24.45■■□□□ 1.5
VGF-201ENST00000249330 PIGBQ92521 554 aa24.45■■□□□ 1.5
VGF-201ENST00000249330 ERC2O15083 957 aa24.45■■□□□ 1.5
VGF-201ENST00000249330 RBM27Q9P2N5 1060 aaKnown RBP24.45■■□□□ 1.5
VGF-201ENST00000249330 ASAP1Q9ULH1 1129 aa24.45■■□□□ 1.5
VGF-201ENST00000249330 ZDHHC9Q9Y397 364 aa24.44■■□□□ 1.5
VGF-201ENST00000249330 N4BP2Q86UW6 1770 aaPredicted RBP24.44■■□□□ 1.5
VGF-201ENST00000249330 KAT6BQ8WYB5 2073 aa24.43■■□□□ 1.5
VGF-201ENST00000249330 TOGARAM1Q9Y4F4 1720 aa24.43■■□□□ 1.5
VGF-201ENST00000249330 GLI3P10071 1580 aa24.43■■□□□ 1.5
VGF-201ENST00000249330 NBPF26B4DH59 902 aa24.43■■□□□ 1.5
VGF-201ENST00000249330 A1BGP04217 495 aa24.43■■□□□ 1.5
VGF-201ENST00000249330 NBPF14Q5TI25 921 aa24.43■■□□□ 1.5
VGF-201ENST00000249330 NBPF10Q6P3W6 841 aaKnown RBP24.43■■□□□ 1.5
VGF-201ENST00000249330 NBPF15Q8N660 670 aa24.43■■□□□ 1.5
VGF-201ENST00000249330 C9orf78Q9NZ63 289 aaPredicted RBP24.43■■□□□ 1.5
VGF-201ENST00000249330 SPATA31A1Q5TZJ5 1347 aa24.42■■□□□ 1.5
VGF-201ENST00000249330 ZNF500O60304 480 aaPredicted RBP24.42■■□□□ 1.5
VGF-201ENST00000249330 PPP1R42Q7Z4L9 355 aa24.42■■□□□ 1.5
VGF-201ENST00000249330 CCDC9Q9Y3X0 531 aaKnown RBP24.42■■□□□ 1.5
VGF-201ENST00000249330 PLCH1Q4KWH8 1693 aa24.42■■□□□ 1.5
VGF-201ENST00000249330 IGKV5-2P06315 115 aa24.42■■□□□ 1.5
VGF-201ENST00000249330 LRSAM1Q6UWE0 723 aa24.42■■□□□ 1.5
VGF-201ENST00000249330 ANKRD13DQ6ZTN6 518 aa24.42■■□□□ 1.5
VGF-201ENST00000249330 LINS1Q8NG48 757 aa24.41■■□□□ 1.5
VGF-201ENST00000249330 SYTL4Q96C24 671 aaPredicted RBP24.41■■□□□ 1.5
VGF-201ENST00000249330 KCPQ6ZWJ8 1503 aa24.4■■□□□ 1.5
VGF-201ENST00000249330 ALDH1L1O75891 902 aa24.4■■□□□ 1.5
VGF-201ENST00000249330 MYD88Q99836 296 aa24.4■■□□□ 1.5
VGF-201ENST00000249330 SRGAP3O43295 1099 aa24.39■■□□□ 1.5
VGF-201ENST00000249330 TMEM63CQ9P1W3 806 aa24.39■■□□□ 1.5
VGF-201ENST00000249330 R3HCC1Q9Y3T6 440 aaKnown RBP24.39■■□□□ 1.5
VGF-201ENST00000249330 MBD3O95983 291 aa24.39■■□□□ 1.49
VGF-201ENST00000249330 ATG3Q9NT62 314 aa24.39■■□□□ 1.49
VGF-201ENST00000249330 SYCE3A1L190 88 aa24.38■■□□□ 1.49
VGF-201ENST00000249330 SSH3Q8TE77 659 aa24.38■■□□□ 1.49
VGF-201ENST00000249330 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.38■■□□□ 1.49
VGF-201ENST00000249330 ZKSCAN5Q9Y2L8 839 aa24.38■■□□□ 1.49
VGF-201ENST00000249330 C8orf37Q96NL8 207 aa24.37■■□□□ 1.49
VGF-201ENST00000249330 METTL22Q9BUU2 404 aaPredicted RBP24.37■■□□□ 1.49
VGF-201ENST00000249330 MCM5P33992 734 aa24.37■■□□□ 1.49
VGF-201ENST00000249330 GRM8O00222 908 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms