RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 PI4K2BQ8TCG2 481 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 DNAAF4Q8WXU2 420 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
SGPP1-201ENST00000247225 AMOTL2Q9Y2J4 779 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 ROBO2Q9HCK4 1378 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 RAD50Q92878 1312 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 CCDC192P0DO97 292 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 NAA30Q147X3 362 aaPredicted RBP20.11■□□□□ 0.81
SGPP1-201ENST00000247225 MYRIPQ8NFW9 859 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 AATKQ6ZMQ8 1374 aa20.11■□□□□ 0.81
SGPP1-201ENST00000247225 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
SGPP1-201ENST00000247225 RIOK3O14730 519 aaKnown RBP20.1■□□□□ 0.81
SGPP1-201ENST00000247225 FAM184AQ8NB25 1140 aa20.1■□□□□ 0.81
SGPP1-201ENST00000247225 TNMDQ9H2S6 317 aa20.1■□□□□ 0.81
SGPP1-201ENST00000247225 NEURL4Q96JN8 1562 aa20.1■□□□□ 0.81
SGPP1-201ENST00000247225 A0A0U1RQG5 324 aaPredicted RBP20.1■□□□□ 0.81
SGPP1-201ENST00000247225 CHGBP05060 677 aa20.1■□□□□ 0.81
SGPP1-201ENST00000247225 U2AF2P26368 475 aaKnown RBP eCLIP20.1■□□□□ 0.817e-7■■■□□ 15.8
SGPP1-201ENST00000247225 MTMR6Q9Y217 621 aa20.1■□□□□ 0.81
SGPP1-201ENST00000247225 RBM8AQ9Y5S9 174 aaKnown RBP20.1■□□□□ 0.81
SGPP1-201ENST00000247225 TAF6LQ9Y6J9 622 aa20.1■□□□□ 0.81
SGPP1-201ENST00000247225 CPSF1Q10570 1443 aaKnown RBP20.1■□□□□ 0.81
SGPP1-201ENST00000247225 MYL6BP14649 208 aa20.1■□□□□ 0.81
SGPP1-201ENST00000247225 RPAP1Q9BWH6 1393 aaPredicted RBP20.1■□□□□ 0.81
SGPP1-201ENST00000247225 MYO5BQ9ULV0 1848 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 NUP62CLQ9H1M0 184 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 BCL2L12Q9HB09 334 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 LTKP29376 864 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 GUCY1B3Q02153 619 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 MAP3K2Q9Y2U5 619 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 ANO6Q4KMQ2 910 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 TTC6Q86TZ1 520 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 HYPKQ9NX55 129 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 TPCN1Q9ULQ1 816 aa20.09■□□□□ 0.81
SGPP1-201ENST00000247225 CRB1P82279 1406 aa20.08■□□□□ 0.81
SGPP1-201ENST00000247225 PDCL2Q8N4E4 241 aa20.08■□□□□ 0.81
SGPP1-201ENST00000247225 SSH3Q8TE77 659 aa20.08■□□□□ 0.81
SGPP1-201ENST00000247225 SPATA32Q96LK8 384 aa20.08■□□□□ 0.81
SGPP1-201ENST00000247225 STAP2Q9UGK3 403 aa20.08■□□□□ 0.81
SGPP1-201ENST00000247225 SALL3Q9BXA9 1300 aa20.08■□□□□ 0.81
SGPP1-201ENST00000247225 SYTL4Q96C24 671 aaPredicted RBP20.08■□□□□ 0.8
SGPP1-201ENST00000247225 ATP7BP35670 1465 aa20.08■□□□□ 0.8
SGPP1-201ENST00000247225 BTBD11A6QL63 1104 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 H3BQV1 296 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 KRT85P78386 507 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 G3BP1Q13283 466 aaKnown RBP eCLIP20.07■□□□□ 0.8
SGPP1-201ENST00000247225 IFFO2Q5TF58 517 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 ZNF710Q8N1W2 664 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 DNAJC2Q99543 621 aaKnown RBP20.07■□□□□ 0.8
SGPP1-201ENST00000247225 GLRX3O76003 335 aaKnown RBP20.07■□□□□ 0.8
SGPP1-201ENST00000247225 NMIQ13287 307 aaPredicted RBP20.07■□□□□ 0.8
SGPP1-201ENST00000247225 MAP3K11Q16584 847 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 PROSER3Q2NL68 480 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 FILIP1Q7Z7B0 1213 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 DNAJC25Q9H1X3 360 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
SGPP1-201ENST00000247225 TRMT1Q9NXH9 659 aaKnown RBP20.07■□□□□ 0.8
SGPP1-201ENST00000247225 TLR7Q9NYK1 1049 aaKnown RBP20.07■□□□□ 0.8
SGPP1-201ENST00000247225 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
SGPP1-201ENST00000247225 GOLGA6L6A8MZA4 724 aa20.06■□□□□ 0.8
SGPP1-201ENST00000247225 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
SGPP1-201ENST00000247225 ECHDC1Q9NTX5 307 aa20.06■□□□□ 0.8
SGPP1-201ENST00000247225 JAK2O60674 1132 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 TERF1P54274 439 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 HMGN5P82970 282 aaKnown RBP20.05■□□□□ 0.8
SGPP1-201ENST00000247225 GPATCH3Q96I76 525 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 KCNF1Q9H3M0 494 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.05■□□□□ 0.8
SGPP1-201ENST00000247225 TCHHQ07283 1943 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 BLOC1S2Q6QNY1 142 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 CCDC94Q9BW85 323 aaPredicted RBP20.05■□□□□ 0.8
SGPP1-201ENST00000247225 TYRO3Q06418 890 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 TTC14Q96N46 770 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 FMNL2Q96PY5 1086 aa20.05■□□□□ 0.8
SGPP1-201ENST00000247225 TPD52L1Q16890 204 aaPredicted RBP20.04■□□□□ 0.8
SGPP1-201ENST00000247225 CREB3L3Q68CJ9 461 aa20.04■□□□□ 0.8
SGPP1-201ENST00000247225 CCDC129Q6ZRS4 1044 aa20.04■□□□□ 0.8
SGPP1-201ENST00000247225 UVSSAQ2YD98 709 aa20.04■□□□□ 0.8
SGPP1-201ENST00000247225 LETM1O95202 739 aaPredicted RBP20.04■□□□□ 0.8
SGPP1-201ENST00000247225 HOXC9P31274 260 aa20.04■□□□□ 0.8
SGPP1-201ENST00000247225 SETD1BQ9UPS6 1966 aaKnown RBP20.02■□□□□ 0.8
SGPP1-201ENST00000247225 SLFNL1Q499Z3 407 aa20.02■□□□□ 0.8
SGPP1-201ENST00000247225 ZBTB9Q96C00 473 aa20.02■□□□□ 0.8
SGPP1-201ENST00000247225 FTOQ9C0B1 505 aaKnown RBP eCLIP20.02■□□□□ 0.8
SGPP1-201ENST00000247225 SLC39A6Q13433 755 aa20.02■□□□□ 0.8
SGPP1-201ENST00000247225 ARID5BQ14865 1188 aa20.02■□□□□ 0.8
SGPP1-201ENST00000247225 CCT2P78371 535 aaKnown RBP20.02■□□□□ 0.79
SGPP1-201ENST00000247225 CHST3Q7LGC8 479 aa20.02■□□□□ 0.79
SGPP1-201ENST00000247225 RAB11FIP4Q86YS3 637 aa20.02■□□□□ 0.79
SGPP1-201ENST00000247225 A0A0D9SFI3 127 aa20.01■□□□□ 0.79
SGPP1-201ENST00000247225 EID1Q9Y6B2 187 aa20.01■□□□□ 0.79
SGPP1-201ENST00000247225 RIC3Q7Z5B4 369 aa20.01■□□□□ 0.79
SGPP1-201ENST00000247225 MTERF4Q7Z6M4 381 aaKnown RBP20.01■□□□□ 0.79
SGPP1-201ENST00000247225 EAF2Q96CJ1 260 aaPredicted RBP20.01■□□□□ 0.79
SGPP1-201ENST00000247225 CBX8Q9HC52 389 aa20.01■□□□□ 0.79
SGPP1-201ENST00000247225 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 NR1I2O75469 434 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 ZNF165P49910 485 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 PRIMPOLQ96LW4 560 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms