RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 ANO2Q9NQ90 1003 aa18.45■□□□□ 0.54
DDX49-201ENST00000247003 COPS6Q7L5N1 327 aa18.44■□□□□ 0.54
DDX49-201ENST00000247003 EPB41L2O43491 1005 aaKnown RBP18.44■□□□□ 0.54
DDX49-201ENST00000247003 PI4K2BQ8TCG2 481 aa18.44■□□□□ 0.54
DDX49-201ENST00000247003 METTL22Q9BUU2 404 aaPredicted RBP18.44■□□□□ 0.54
DDX49-201ENST00000247003 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
DDX49-201ENST00000247003 USP42Q9H9J4 1324 aaKnown RBP18.43■□□□□ 0.54
DDX49-201ENST00000247003 AFDNP55196 1824 aaKnown RBP18.43■□□□□ 0.54
DDX49-201ENST00000247003 GLRX3O76003 335 aaKnown RBP18.43■□□□□ 0.54
DDX49-201ENST00000247003 ANKRD13DQ6ZTN6 518 aa18.43■□□□□ 0.54
DDX49-201ENST00000247003 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
DDX49-201ENST00000247003 MYD88Q99836 296 aa18.43■□□□□ 0.54
DDX49-201ENST00000247003 ARFGEF2Q9Y6D5 1785 aa18.43■□□□□ 0.54
DDX49-201ENST00000247003 NEURL1BA8MQ27 555 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
DDX49-201ENST00000247003 IL2RBP14784 551 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 PTMSP20962 102 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 ANAPC15P60006 121 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 CARD10Q9BWT7 1032 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 BICC1Q9H694 974 aaKnown RBP18.42■□□□□ 0.54
DDX49-201ENST00000247003 ERBB4Q15303 1308 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 ERVV-2B6SEH9 535 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
DDX49-201ENST00000247003 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 USP16Q9Y5T5 823 aa18.42■□□□□ 0.54
DDX49-201ENST00000247003 IGKV5-2P06315 115 aa18.41■□□□□ 0.54
DDX49-201ENST00000247003 EVA1CP58658 441 aa18.41■□□□□ 0.54
DDX49-201ENST00000247003 UNC5CLQ8IV45 518 aa18.41■□□□□ 0.54
DDX49-201ENST00000247003 GLI3P10071 1580 aa18.4■□□□□ 0.54
DDX49-201ENST00000247003 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
DDX49-201ENST00000247003 MCM2P49736 904 aa18.4■□□□□ 0.54
DDX49-201ENST00000247003 GCKRQ14397 625 aa18.4■□□□□ 0.54
DDX49-201ENST00000247003 TNPO1Q92973 898 aaKnown RBP18.4■□□□□ 0.54
DDX49-201ENST00000247003 PAPPAQ13219 1627 aa18.4■□□□□ 0.54
DDX49-201ENST00000247003 STRN4Q9NRL3 753 aa18.39■□□□□ 0.54
DDX49-201ENST00000247003 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.54
DDX49-201ENST00000247003 PA2G4Q9UQ80 394 aaKnown RBP18.39■□□□□ 0.54
DDX49-201ENST00000247003 MAP4K4O95819 1239 aaPredicted RBP18.39■□□□□ 0.53
DDX49-201ENST00000247003 IL27Q8NEV9 243 aa18.39■□□□□ 0.53
DDX49-201ENST00000247003 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
DDX49-201ENST00000247003 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 AACSQ86V21 672 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 RUFY2Q8WXA3 655 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 NEK4P51957 841 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 NUCB2P80303 420 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 LRP10Q7Z4F1 713 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 PLBD2Q8NHP8 589 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 KAZALD1Q96I82 304 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 DIAPH3Q9NSV4 1193 aa18.37■□□□□ 0.53
DDX49-201ENST00000247003 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
DDX49-201ENST00000247003 TRAK2O60296 914 aa18.35■□□□□ 0.53
DDX49-201ENST00000247003 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
DDX49-201ENST00000247003 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
DDX49-201ENST00000247003 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
DDX49-201ENST00000247003 COL15A1P39059 1388 aa18.35■□□□□ 0.53
DDX49-201ENST00000247003 SGSM2O43147 1006 aa18.35■□□□□ 0.53
DDX49-201ENST00000247003 RAD50Q92878 1312 aa18.34■□□□□ 0.53
DDX49-201ENST00000247003 SIL1Q9H173 461 aa18.34■□□□□ 0.53
DDX49-201ENST00000247003 HIP1O00291 1037 aa18.33■□□□□ 0.53
DDX49-201ENST00000247003 EVI5LQ96CN4 794 aa18.33■□□□□ 0.53
DDX49-201ENST00000247003 A0A087WZG4 1122 aa18.33■□□□□ 0.52
DDX49-201ENST00000247003 HSPA4P34932 840 aa18.33■□□□□ 0.52
DDX49-201ENST00000247003 SKOR2Q2VWA4 1001 aaPredicted RBP18.33■□□□□ 0.52
DDX49-201ENST00000247003 L1TD1Q5T7N2 865 aaKnown RBP18.33■□□□□ 0.52
DDX49-201ENST00000247003 UBE3BQ7Z3V4 1068 aa18.33■□□□□ 0.52
DDX49-201ENST00000247003 IL17RAQ96F46 866 aa18.33■□□□□ 0.52
DDX49-201ENST00000247003 NUP188Q5SRE5 1749 aa18.32■□□□□ 0.52
DDX49-201ENST00000247003 SASH1O94885 1247 aa18.32■□□□□ 0.52
DDX49-201ENST00000247003 CWC27Q6UX04 472 aaKnown RBP18.32■□□□□ 0.52
DDX49-201ENST00000247003 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
DDX49-201ENST00000247003 TNS2Q63HR2 1409 aa18.32■□□□□ 0.52
DDX49-201ENST00000247003 SSFA2P28290 1259 aa18.31■□□□□ 0.52
DDX49-201ENST00000247003 TMOD3Q9NYL9 352 aa18.31■□□□□ 0.52
DDX49-201ENST00000247003 COL14A1Q05707 1796 aaKnown RBP18.31■□□□□ 0.52
DDX49-201ENST00000247003 ATP5J2-PTCD1G3V325 749 aa18.3■□□□□ 0.52
DDX49-201ENST00000247003 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
DDX49-201ENST00000247003 COPRSQ9NQ92 184 aa18.3■□□□□ 0.52
DDX49-201ENST00000247003 TOGARAM1Q9Y4F4 1720 aa18.3■□□□□ 0.52
DDX49-201ENST00000247003 EAF2Q96CJ1 260 aaPredicted RBP18.3■□□□□ 0.52
DDX49-201ENST00000247003 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
DDX49-201ENST00000247003 EPHA10Q5JZY3 1008 aa18.29■□□□□ 0.52
DDX49-201ENST00000247003 TMX3Q96JJ7 454 aa18.29■□□□□ 0.52
DDX49-201ENST00000247003 CCDC8Q9H0W5 538 aaPredicted RBP18.29■□□□□ 0.52
DDX49-201ENST00000247003 CWC25Q9NXE8 425 aaPredicted RBP18.29■□□□□ 0.52
DDX49-201ENST00000247003 CLEC17AQ6ZS10 378 aa18.28■□□□□ 0.52
DDX49-201ENST00000247003 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
DDX49-201ENST00000247003 IL25Q9H293 177 aa18.28■□□□□ 0.52
DDX49-201ENST00000247003 NBPF26B4DH59 902 aa18.28■□□□□ 0.52
DDX49-201ENST00000247003 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
DDX49-201ENST00000247003 NBPF10Q6P3W6 841 aaKnown RBP18.28■□□□□ 0.52
DDX49-201ENST00000247003 NBPF15Q8N660 670 aa18.28■□□□□ 0.52
DDX49-201ENST00000247003 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
DDX49-201ENST00000247003 GZF1Q9H116 711 aaPredicted RBP18.28■□□□□ 0.52
DDX49-201ENST00000247003 BTG4Q9NY30 223 aa18.28■□□□□ 0.52
DDX49-201ENST00000247003 ROBO1Q9Y6N7 1651 aa18.27■□□□□ 0.51
DDX49-201ENST00000247003 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
DDX49-201ENST00000247003 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
DDX49-201ENST00000247003 INTS4Q96HW7 963 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms