RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
TRAP1-201ENST00000246957 AK7Q96M32 723 aa16.68■□□□□ 0.26
TRAP1-201ENST00000246957 COL15A1P39059 1388 aa16.68■□□□□ 0.26
TRAP1-201ENST00000246957 SOS1Q07889 1333 aaPredicted RBP16.67■□□□□ 0.26
TRAP1-201ENST00000246957 TEX13AQ9BXU3 409 aaPredicted RBP16.67■□□□□ 0.26
TRAP1-201ENST00000246957 HYPKQ9NX55 129 aa16.67■□□□□ 0.26
TRAP1-201ENST00000246957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.67■□□□□ 0.26
TRAP1-201ENST00000246957 BAG6P46379 1132 aa16.67■□□□□ 0.26
TRAP1-201ENST00000246957 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
TRAP1-201ENST00000246957 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
TRAP1-201ENST00000246957 GPTP24298 496 aa16.66■□□□□ 0.26
TRAP1-201ENST00000246957 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
TRAP1-201ENST00000246957 ARHGEF1Q92888 912 aaKnown RBP16.66■□□□□ 0.26
TRAP1-201ENST00000246957 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
TRAP1-201ENST00000246957 SLC27A3Q5K4L6 730 aa16.66■□□□□ 0.26
TRAP1-201ENST00000246957 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
TRAP1-201ENST00000246957 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
TRAP1-201ENST00000246957 TFCP2L1Q9NZI6 479 aa16.66■□□□□ 0.26
TRAP1-201ENST00000246957 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
TRAP1-201ENST00000246957 MYD88Q99836 296 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 BICDL1Q6ZP65 573 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 SYNE4Q8N205 404 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
TRAP1-201ENST00000246957 MSH5O43196 834 aa16.64■□□□□ 0.25
TRAP1-201ENST00000246957 IGKV5-2P06315 115 aa16.64■□□□□ 0.25
TRAP1-201ENST00000246957 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
TRAP1-201ENST00000246957 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
TRAP1-201ENST00000246957 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
TRAP1-201ENST00000246957 CCDC24Q8N4L8 307 aa16.63■□□□□ 0.25
TRAP1-201ENST00000246957 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
TRAP1-201ENST00000246957 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
TRAP1-201ENST00000246957 ABCC4O15439 1325 aa16.63■□□□□ 0.25
TRAP1-201ENST00000246957 ANKRD36CQ5JPF3 1778 aa16.63■□□□□ 0.25
TRAP1-201ENST00000246957 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
TRAP1-201ENST00000246957 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
TRAP1-201ENST00000246957 DNAAF4Q8WXU2 420 aa16.63■□□□□ 0.25
TRAP1-201ENST00000246957 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
TRAP1-201ENST00000246957 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
TRAP1-201ENST00000246957 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
TRAP1-201ENST00000246957 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
TRAP1-201ENST00000246957 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
TRAP1-201ENST00000246957 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
TRAP1-201ENST00000246957 MEIS3Q99687 375 aa16.61■□□□□ 0.25
TRAP1-201ENST00000246957 PTPRCP08575 1304 aa16.61■□□□□ 0.25
TRAP1-201ENST00000246957 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
TRAP1-201ENST00000246957 MAP3K15Q6ZN16 1313 aa16.61■□□□□ 0.25
TRAP1-201ENST00000246957 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
TRAP1-201ENST00000246957 UBN2Q6ZU65 1347 aa16.6■□□□□ 0.25
TRAP1-201ENST00000246957 RC3H1Q5TC82 1133 aaKnown RBP16.6■□□□□ 0.25
TRAP1-201ENST00000246957 KIF6Q6ZMV9 814 aa16.6■□□□□ 0.25
TRAP1-201ENST00000246957 PLBD2Q8NHP8 589 aa16.6■□□□□ 0.25
TRAP1-201ENST00000246957 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
TRAP1-201ENST00000246957 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
TRAP1-201ENST00000246957 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
TRAP1-201ENST00000246957 TAF1P21675 1872 aa16.59■□□□□ 0.25
TRAP1-201ENST00000246957 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
TRAP1-201ENST00000246957 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
TRAP1-201ENST00000246957 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
TRAP1-201ENST00000246957 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
TRAP1-201ENST00000246957 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
TRAP1-201ENST00000246957 RFC4P35249 363 aa16.58■□□□□ 0.25
TRAP1-201ENST00000246957 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
TRAP1-201ENST00000246957 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
TRAP1-201ENST00000246957 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
TRAP1-201ENST00000246957 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.24
TRAP1-201ENST00000246957 METTL22Q9BUU2 404 aaPredicted RBP16.58■□□□□ 0.24
TRAP1-201ENST00000246957 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
TRAP1-201ENST00000246957 NEURL1BA8MQ27 555 aa16.57■□□□□ 0.24
TRAP1-201ENST00000246957 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
TRAP1-201ENST00000246957 GIGYF2Q6Y7W6 1299 aaKnown RBP16.57■□□□□ 0.24
TRAP1-201ENST00000246957 GYS1P13807 737 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 USP44Q9H0E7 712 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 ZPR1O75312 459 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 NARFQ9UHQ1 456 aa16.56■□□□□ 0.24
TRAP1-201ENST00000246957 INTS3Q68E01 1043 aaKnown RBP16.55■□□□□ 0.24
TRAP1-201ENST00000246957 STK32BQ9NY57 414 aa16.55■□□□□ 0.24
TRAP1-201ENST00000246957 NIP7Q9Y221 180 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRAP1-201ENST00000246957 TCIRG1Q13488 830 aa16.54■□□□□ 0.24
TRAP1-201ENST00000246957 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
TRAP1-201ENST00000246957 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
TRAP1-201ENST00000246957 ZBTB7BO15156 539 aaPredicted RBP16.54■□□□□ 0.24
TRAP1-201ENST00000246957 SSFA2P28290 1259 aa16.54■□□□□ 0.24
TRAP1-201ENST00000246957 SUSD4Q5VX71 490 aa16.54■□□□□ 0.24
TRAP1-201ENST00000246957 CCDC125Q86Z20 511 aa16.54■□□□□ 0.24
TRAP1-201ENST00000246957 NEFLP07196 543 aa16.53■□□□□ 0.24
TRAP1-201ENST00000246957 ZBTB7AO95365 584 aa16.53■□□□□ 0.24
TRAP1-201ENST00000246957 GCKRQ14397 625 aa16.53■□□□□ 0.24
TRAP1-201ENST00000246957 EPHA10Q5JZY3 1008 aa16.53■□□□□ 0.24
TRAP1-201ENST00000246957 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
TRAP1-201ENST00000246957 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
TRAP1-201ENST00000246957 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms