RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 ZRANB2O95218 330 aaKnown RBP eCLIP11.43□□□□□ -0.58
IRF1-201ENST00000245414 FAM177A1Q8N128 213 aaPredicted RBP11.43□□□□□ -0.58
IRF1-201ENST00000245414 SMC3Q9UQE7 1217 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 MRVI1Q9Y6F6 885 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 ELP1O95163 1332 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 CCDC141Q6ZP82 1450 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 NUTM2FA1L443 756 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
IRF1-201ENST00000245414 EVCP57679 992 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
IRF1-201ENST00000245414 CARD6Q9BX69 1037 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 CT47B1P0C2W7 299 aaPredicted RBP11.43□□□□□ -0.58
IRF1-201ENST00000245414 MTHFSP49914 203 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 LIG3P49916 1009 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 CORO7P57737 925 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 EFCAB13Q8IY85 973 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
IRF1-201ENST00000245414 STX6O43752 255 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 ERLIN2O94905 339 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 HSP90B2PQ58FF3 399 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 TTC19Q6DKK2 380 aaPredicted RBP11.42□□□□□ -0.58
IRF1-201ENST00000245414 TADA2BQ86TJ2 420 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 SH3BP1Q9Y3L3 701 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 WDR7Q9Y4E6 1490 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 PLXNC1O60486 1568 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 ERBB3P21860 1342 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 ELL2O00472 640 aaPredicted RBP11.42□□□□□ -0.58
IRF1-201ENST00000245414 PHACTR2O75167 634 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 SASH3O75995 380 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 OTUD7AQ8TE49 926 aaPredicted RBP11.42□□□□□ -0.58
IRF1-201ENST00000245414 CUL4AQ13619 759 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 JPH2Q9BR39 696 aaPredicted RBP11.42□□□□□ -0.58
IRF1-201ENST00000245414 A2MP01023 1474 aa11.42□□□□□ -0.58
IRF1-201ENST00000245414 ASXL1Q8IXJ9 1541 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 CCDC189A1A4V9 331 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 KIF3BO15066 747 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 TBC1D8O95759 1140 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 DHX8Q14562 1220 aaKnown RBP11.41□□□□□ -0.58
IRF1-201ENST00000245414 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 PLA2G4DQ86XP0 818 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 TICAM2Q86XR7 235 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 CDC42BPBQ9Y5S2 1711 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 ATP8B1O43520 1251 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
IRF1-201ENST00000245414 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 TMEM87AQ8NBN3 555 aa11.41□□□□□ -0.58
IRF1-201ENST00000245414 F13A1P00488 732 aa11.4□□□□□ -0.58
IRF1-201ENST00000245414 CC2D1AQ6P1N0 951 aaPredicted RBP11.4□□□□□ -0.58
IRF1-201ENST00000245414 DACT1Q9NYF0 836 aa11.4□□□□□ -0.58
IRF1-201ENST00000245414 PSD3Q9NYI0 1048 aa11.4□□□□□ -0.58
IRF1-201ENST00000245414 A0A087WUV0 522 aaPredicted RBP11.4□□□□□ -0.58
IRF1-201ENST00000245414 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
IRF1-201ENST00000245414 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
IRF1-201ENST00000245414 SYT1P21579 422 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 TRDNQ13061 729 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
IRF1-201ENST00000245414 BICD2Q8TD16 824 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 ZSCAN16Q9H4T2 348 aaPredicted RBP11.39□□□□□ -0.59
IRF1-201ENST00000245414 IQUBQ8NA54 791 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 PDE11AQ9HCR9 933 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 KDM5DQ9BY66 1539 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 TTC37Q6PGP7 1564 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 PREX2Q70Z35 1606 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 NF2P35240 595 aa11.39□□□□□ -0.59
IRF1-201ENST00000245414 EIF3JO75822 258 aaKnown RBP11.38□□□□□ -0.59
IRF1-201ENST00000245414 CCDC158Q5M9N0 1113 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 FERMT3Q86UX7 667 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 RILPL2Q969X0 211 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 L2HGDHQ9H9P8 463 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 SAMD9LQ8IVG5 1584 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 ZBTB7BO15156 539 aaPredicted RBP11.38□□□□□ -0.59
IRF1-201ENST00000245414 LIG1P18858 919 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 PRPF38AQ8NAV1 312 aaKnown RBP11.38□□□□□ -0.59
IRF1-201ENST00000245414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.38□□□□□ -0.59
IRF1-201ENST00000245414 FBXW10Q5XX13 1052 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 ZSWIM4Q9H7M6 989 aa11.38□□□□□ -0.59
IRF1-201ENST00000245414 H3BQF6 201 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 ARID4AP29374 1257 aaPredicted RBP11.37□□□□□ -0.59
IRF1-201ENST00000245414 ERC1Q8IUD2 1116 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 FAM107BQ9H098 131 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 SLC12A5Q9H2X9 1139 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 EIF5P55010 431 aaKnown RBP11.37□□□□□ -0.59
IRF1-201ENST00000245414 NBPF11Q86T75 865 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 TDRD7Q8NHU6 1098 aaKnown RBP11.37□□□□□ -0.59
IRF1-201ENST00000245414 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 SHANK2Q9UPX8 1470 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 EFCAB8A8MWE9 144 aa11.37□□□□□ -0.59
IRF1-201ENST00000245414 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
IRF1-201ENST00000245414 MAP9Q49MG5 647 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms