RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 SPHKAPQ2M3C7 1700 aa19.87■□□□□ 0.77
PTK7-202ENST00000230419 KSR2Q6VAB6 950 aa19.87■□□□□ 0.77
PTK7-202ENST00000230419 CCAR2Q8N163 923 aaKnown RBP19.87■□□□□ 0.77
PTK7-202ENST00000230419 CEP152O94986 1710 aa19.86■□□□□ 0.77
PTK7-202ENST00000230419 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
PTK7-202ENST00000230419 GJB2P29033 226 aa19.86■□□□□ 0.77
PTK7-202ENST00000230419 KINO60870 393 aaKnown RBP19.86■□□□□ 0.77
PTK7-202ENST00000230419 TIMM10P62072 90 aa19.86■□□□□ 0.77
PTK7-202ENST00000230419 ACSBG1Q96GR2 724 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 TMOD3Q9NYL9 352 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 A1BGP04217 495 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 RAB3GAP1Q15042 981 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 ZNF496Q96IT1 587 aaPredicted RBP19.85■□□□□ 0.77
PTK7-202ENST00000230419 SBNO1A3KN83 1393 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 RBM25P49756 843 aaKnown RBP19.85■□□□□ 0.77
PTK7-202ENST00000230419 STK38Q15208 465 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 ZSCAN23Q3MJ62 389 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 USP16Q9Y5T5 823 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 RTL1A6NKG5 1358 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 CCDC129Q6ZRS4 1044 aa19.85■□□□□ 0.77
PTK7-202ENST00000230419 HECW2Q9P2P5 1572 aa19.84■□□□□ 0.77
PTK7-202ENST00000230419 IFIT1P09914 478 aaKnown RBP19.84■□□□□ 0.77
PTK7-202ENST00000230419 HELBQ8NG08 1087 aaPredicted RBP19.84■□□□□ 0.77
PTK7-202ENST00000230419 KLHL40Q2TBA0 621 aa19.84■□□□□ 0.77
PTK7-202ENST00000230419 SLC4A8Q2Y0W8 1093 aa19.84■□□□□ 0.77
PTK7-202ENST00000230419 CNPY2Q9Y2B0 182 aa19.84■□□□□ 0.77
PTK7-202ENST00000230419 METTL24Q5JXM2 366 aa19.84■□□□□ 0.77
PTK7-202ENST00000230419 ZNF594Q96JF6 807 aaPredicted RBP19.84■□□□□ 0.77
PTK7-202ENST00000230419 FAM227BQ96M60 508 aa19.84■□□□□ 0.77
PTK7-202ENST00000230419 STX6O43752 255 aa19.83■□□□□ 0.77
PTK7-202ENST00000230419 ABCF2Q9UG63 623 aa19.83■□□□□ 0.77
PTK7-202ENST00000230419 TBC1D2BQ9UPU7 963 aa19.83■□□□□ 0.77
PTK7-202ENST00000230419 ZNF853P0CG23 659 aa19.83■□□□□ 0.77
PTK7-202ENST00000230419 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.77
PTK7-202ENST00000230419 SOS1Q07889 1333 aaPredicted RBP19.83■□□□□ 0.76
PTK7-202ENST00000230419 SNRPA1P09661 255 aaKnown RBP19.83■□□□□ 0.76
PTK7-202ENST00000230419 CCDC144CPQ8IYA2 1237 aa19.83■□□□□ 0.76
PTK7-202ENST00000230419 PRIM1P49642 420 aaKnown RBP19.82■□□□□ 0.76
PTK7-202ENST00000230419 RBM8AQ9Y5S9 174 aaKnown RBP19.82■□□□□ 0.76
PTK7-202ENST00000230419 HCLS1P14317 486 aaPredicted RBP19.82■□□□□ 0.76
PTK7-202ENST00000230419 NMIQ13287 307 aaPredicted RBP19.82■□□□□ 0.76
PTK7-202ENST00000230419 GIMAP6Q6P9H5 292 aa19.82■□□□□ 0.76
PTK7-202ENST00000230419 CCDC192P0DO97 292 aa19.82■□□□□ 0.76
PTK7-202ENST00000230419 ZNF830Q96NB3 372 aaPredicted RBP19.82■□□□□ 0.76
PTK7-202ENST00000230419 ERICH2A1L162 156 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 SUCLG2Q96I99 432 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 MPHOSPH8Q99549 860 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 C19orf44Q9H6X5 657 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 ANKRD1Q15327 319 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 TPD52L1Q16890 204 aaPredicted RBP19.81■□□□□ 0.76
PTK7-202ENST00000230419 EVI5LQ96CN4 794 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 NUP62CLQ9H1M0 184 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 AK2P54819 239 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 TFCP2Q12800 502 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 FILIP1Q7Z7B0 1213 aa19.81■□□□□ 0.76
PTK7-202ENST00000230419 ZNF790Q6PG37 636 aa19.8■□□□□ 0.76
PTK7-202ENST00000230419 ZSCAN30Q86W11 494 aa19.8■□□□□ 0.76
PTK7-202ENST00000230419 HOMER1Q86YM7 354 aa19.8■□□□□ 0.76
PTK7-202ENST00000230419 NUP133Q8WUM0 1156 aa19.8■□□□□ 0.76
PTK7-202ENST00000230419 G3V3G9 751 aa19.8■□□□□ 0.76
PTK7-202ENST00000230419 DHX16O60231 1041 aaKnown RBP19.8■□□□□ 0.76
PTK7-202ENST00000230419 DCAF8Q5TAQ9 597 aa19.8■□□□□ 0.76
PTK7-202ENST00000230419 ZSCAN31Q96LW9 406 aaPredicted RBP19.8■□□□□ 0.76
PTK7-202ENST00000230419 TRMT112Q9UI30 125 aaKnown RBP19.8■□□□□ 0.76
PTK7-202ENST00000230419 PPRC1Q5VV67 1664 aaKnown RBP19.8■□□□□ 0.76
PTK7-202ENST00000230419 TULP4Q9NRJ4 1543 aa19.79■□□□□ 0.76
PTK7-202ENST00000230419 LINS1Q8NG48 757 aa19.79■□□□□ 0.76
PTK7-202ENST00000230419 SMC2O95347 1197 aa19.79■□□□□ 0.76
PTK7-202ENST00000230419 GLI2P10070 1586 aa19.78■□□□□ 0.76
PTK7-202ENST00000230419 BRF1Q92994 677 aa19.78■□□□□ 0.76
PTK7-202ENST00000230419 FAM89AQ96GI7 184 aa19.78■□□□□ 0.76
PTK7-202ENST00000230419 USP48Q86UV5 1035 aa19.78■□□□□ 0.76
PTK7-202ENST00000230419 ZCRB1Q8TBF4 217 aaKnown RBP19.78■□□□□ 0.76
PTK7-202ENST00000230419 A2ML1A8K2U0 1454 aa19.77■□□□□ 0.76
PTK7-202ENST00000230419 DNM1Q05193 864 aaKnown RBP19.77■□□□□ 0.76
PTK7-202ENST00000230419 SAFBQ15424 915 aaKnown RBP eCLIP19.77■□□□□ 0.76
PTK7-202ENST00000230419 SAMD1Q6SPF0 538 aaPredicted RBP19.77■□□□□ 0.76
PTK7-202ENST00000230419 LDHAL6AQ6ZMR3 332 aa19.77■□□□□ 0.76
PTK7-202ENST00000230419 CADPS2Q86UW7 1296 aa19.77■□□□□ 0.76
PTK7-202ENST00000230419 CCDC34Q96HJ3 373 aa19.77■□□□□ 0.76
PTK7-202ENST00000230419 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.75
PTK7-202ENST00000230419 DBNDD2Q9BQY9 259 aa19.76■□□□□ 0.75
PTK7-202ENST00000230419 AXIN2Q9Y2T1 843 aa19.76■□□□□ 0.75
PTK7-202ENST00000230419 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
PTK7-202ENST00000230419 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
PTK7-202ENST00000230419 IFIT5Q13325 482 aaKnown RBP19.75■□□□□ 0.75
PTK7-202ENST00000230419 RRAGDQ9NQL2 400 aaPredicted RBP19.75■□□□□ 0.75
PTK7-202ENST00000230419 MARCH6O60337 910 aa19.75■□□□□ 0.75
PTK7-202ENST00000230419 ISM2Q6H9L7 571 aa19.75■□□□□ 0.75
PTK7-202ENST00000230419 PDILTQ8N807 584 aa19.75■□□□□ 0.75
PTK7-202ENST00000230419 CWC25Q9NXE8 425 aaPredicted RBP19.74■□□□□ 0.75
PTK7-202ENST00000230419 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
PTK7-202ENST00000230419 KRT32Q14532 448 aa19.74■□□□□ 0.75
PTK7-202ENST00000230419 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
PTK7-202ENST00000230419 DDX21Q9NR30 783 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTK7-202ENST00000230419 USP6P35125 1406 aa19.74■□□□□ 0.75
PTK7-202ENST00000230419 SEC62Q99442 399 aaKnown RBP19.73■□□□□ 0.75
PTK7-202ENST00000230419 POLR3DP05423 398 aaPredicted RBP19.73■□□□□ 0.75
PTK7-202ENST00000230419 GAS2L3Q86XJ1 694 aa19.73■□□□□ 0.75
PTK7-202ENST00000230419 STARD3NLO95772 234 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms