RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
SF1-201ENST00000227503 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
SF1-201ENST00000227503 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
SF1-201ENST00000227503 IRX5P78411 483 aaPredicted RBP16.85■□□□□ 0.29
SF1-201ENST00000227503 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
SF1-201ENST00000227503 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
SF1-201ENST00000227503 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 ARHGAP23Q9P227 1491 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 GNAI3P08754 354 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 DNM1Q05193 864 aaKnown RBP16.84■□□□□ 0.29
SF1-201ENST00000227503 DRC7Q8IY82 874 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 FUCA2Q9BTY2 467 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 SLIT1O75093 1534 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.84■□□□□ 0.29
SF1-201ENST00000227503 NPHP1O15259 732 aa16.84■□□□□ 0.29
SF1-201ENST00000227503 CDK11BP21127 795 aaKnown RBP16.84■□□□□ 0.29
SF1-201ENST00000227503 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.29
SF1-201ENST00000227503 IL17REQ8NFR9 667 aa16.83■□□□□ 0.28
SF1-201ENST00000227503 INTS4Q96HW7 963 aaKnown RBP16.83■□□□□ 0.28
SF1-201ENST00000227503 TNNT1P13805 278 aa16.83■□□□□ 0.28
SF1-201ENST00000227503 SYT1P21579 422 aa16.83■□□□□ 0.28
SF1-201ENST00000227503 HOXC9P31274 260 aa16.83■□□□□ 0.28
SF1-201ENST00000227503 NLRP6P59044 892 aa16.83■□□□□ 0.28
SF1-201ENST00000227503 FEZ1Q99689 392 aa16.83■□□□□ 0.28
SF1-201ENST00000227503 MCCP23508 829 aa16.82■□□□□ 0.28
SF1-201ENST00000227503 UBE2HP62256 183 aa16.82■□□□□ 0.28
SF1-201ENST00000227503 FAM173BQ6P4H8 233 aa16.82■□□□□ 0.28
SF1-201ENST00000227503 CKAP2LQ8IYA6 745 aa16.82■□□□□ 0.28
SF1-201ENST00000227503 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
SF1-201ENST00000227503 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
SF1-201ENST00000227503 MCM2P49736 904 aa16.82■□□□□ 0.28
SF1-201ENST00000227503 STAP2Q9UGK3 403 aa16.82■□□□□ 0.28
SF1-201ENST00000227503 SOS1Q07889 1333 aaPredicted RBP16.81■□□□□ 0.28
SF1-201ENST00000227503 CHMLP26374 656 aa16.81■□□□□ 0.28
SF1-201ENST00000227503 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
SF1-201ENST00000227503 MARF1Q9Y4F3 1742 aaKnown RBP16.81■□□□□ 0.28
SF1-201ENST00000227503 LARGE1O95461 756 aa16.81■□□□□ 0.28
SF1-201ENST00000227503 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
SF1-201ENST00000227503 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
SF1-201ENST00000227503 STX6O43752 255 aa16.8■□□□□ 0.28
SF1-201ENST00000227503 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
SF1-201ENST00000227503 BABAM1Q9NWV8 329 aa16.8■□□□□ 0.28
SF1-201ENST00000227503 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
SF1-201ENST00000227503 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
SF1-201ENST00000227503 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
SF1-201ENST00000227503 KIF18AQ8NI77 898 aa16.79■□□□□ 0.28
SF1-201ENST00000227503 CHMP4AQ9BY43 222 aa16.79■□□□□ 0.28
SF1-201ENST00000227503 F13A1P00488 732 aa16.79■□□□□ 0.28
SF1-201ENST00000227503 ARID5BQ14865 1188 aa16.79■□□□□ 0.28
SF1-201ENST00000227503 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
SF1-201ENST00000227503 FERMT3Q86UX7 667 aa16.79■□□□□ 0.28
SF1-201ENST00000227503 ANKARQ7Z5J8 1434 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 VPS37CA5D8V6 355 aaPredicted RBP16.78■□□□□ 0.28
SF1-201ENST00000227503 USP27XA6NNY8 438 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 TERF2Q15554 542 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 CACNA1FO60840 1977 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 AK2P54819 239 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
SF1-201ENST00000227503 KMT5BQ4FZB7 885 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 TMEM87AQ8NBN3 555 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 CCDC112Q8NEF3 446 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
SF1-201ENST00000227503 GOLGA6L6A8MZA4 724 aa16.77■□□□□ 0.28
SF1-201ENST00000227503 ANAPC15P60006 121 aa16.77■□□□□ 0.28
SF1-201ENST00000227503 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
SF1-201ENST00000227503 USP54Q70EL1 1684 aa16.77■□□□□ 0.28
SF1-201ENST00000227503 LIG1P18858 919 aa16.77■□□□□ 0.27
SF1-201ENST00000227503 SMTNL1A8MU46 457 aa16.76■□□□□ 0.27
SF1-201ENST00000227503 RASEFQ8IZ41 740 aa16.76■□□□□ 0.27
SF1-201ENST00000227503 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
SF1-201ENST00000227503 TRIM5Q9C035 493 aa16.76■□□□□ 0.27
SF1-201ENST00000227503 GABPB1Q06547 395 aaPredicted RBP16.76■□□□□ 0.27
SF1-201ENST00000227503 RUFY3Q7L099 469 aa16.76■□□□□ 0.27
SF1-201ENST00000227503 ZNF215Q9UL58 517 aaPredicted RBP16.76■□□□□ 0.27
SF1-201ENST00000227503 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
SF1-201ENST00000227503 AOX1Q06278 1338 aa16.76■□□□□ 0.27
SF1-201ENST00000227503 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
SF1-201ENST00000227503 CCDC144BQ3MJ40 725 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 CCDC144CPQ8IYA2 1237 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
SF1-201ENST00000227503 SYTL4Q96C24 671 aaPredicted RBP16.75■□□□□ 0.27
SF1-201ENST00000227503 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
SF1-201ENST00000227503 MRVI1Q9Y6F6 885 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 CCDC192P0DO97 292 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 TAF3Q5VWG9 929 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 ZSCAN25Q6NSZ9 544 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
SF1-201ENST00000227503 ANO6Q4KMQ2 910 aa16.75■□□□□ 0.27
SF1-201ENST00000227503 TYRO3Q06418 890 aa16.74■□□□□ 0.27
SF1-201ENST00000227503 ELF2Q15723 593 aa16.74■□□□□ 0.27
SF1-201ENST00000227503 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
SF1-201ENST00000227503 CERS3Q8IU89 383 aa16.74■□□□□ 0.27
SF1-201ENST00000227503 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
SF1-201ENST00000227503 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
SF1-201ENST00000227503 GJB2P29033 226 aa16.74■□□□□ 0.27
SF1-201ENST00000227503 CBX8Q9HC52 389 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms