RNA–Protein interactions for RNA: ENST00000226004.7

DUSP3-201, Transcript of dual specificity phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP3, Length 4,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-201ENST00000226004 A0A087WZG4 1122 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 HTATSF1O43719 755 aaKnown RBP11.16□□□□□ -0.62
DUSP3-201ENST00000226004 NRDCO43847 1150 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 CHMLP26374 656 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 LARP1Q6PKG0 1096 aaKnown RBP11.16□□□□□ -0.62
DUSP3-201ENST00000226004 ZBTB3Q9H5J0 574 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 IGSF3O75054 1194 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 PPP1R9BQ96SB3 815 aa11.16□□□□□ -0.62
DUSP3-201ENST00000226004 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
DUSP3-201ENST00000226004 HS1BP3Q53T59 392 aa11.15□□□□□ -0.62
DUSP3-201ENST00000226004 HSPA2P54652 639 aa11.15□□□□□ -0.62
DUSP3-201ENST00000226004 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.62
DUSP3-201ENST00000226004 TSC1Q92574 1164 aa11.15□□□□□ -0.62
DUSP3-201ENST00000226004 PIK3C2BO00750 1634 aa11.15□□□□□ -0.62
DUSP3-201ENST00000226004 DEPDC5O75140 1603 aa11.15□□□□□ -0.62
DUSP3-201ENST00000226004 LARP1BQ659C4 914 aaKnown RBP11.15□□□□□ -0.63
DUSP3-201ENST00000226004 HYPKQ9NX55 129 aa11.15□□□□□ -0.63
DUSP3-201ENST00000226004 WDR33Q9C0J8 1336 aaKnown RBP11.14□□□□□ -0.63
DUSP3-201ENST00000226004 BRPF1P55201 1214 aaPredicted RBP11.14□□□□□ -0.63
DUSP3-201ENST00000226004 BLOC1S2Q6QNY1 142 aa11.14□□□□□ -0.63
DUSP3-201ENST00000226004 SOS1Q07889 1333 aaPredicted RBP11.14□□□□□ -0.63
DUSP3-201ENST00000226004 PRAMEF22A3QJZ6 481 aa11.14□□□□□ -0.63
DUSP3-201ENST00000226004 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
DUSP3-201ENST00000226004 NECAB1Q8N987 351 aa11.14□□□□□ -0.63
DUSP3-201ENST00000226004 DDX11Q96FC9 970 aa11.14□□□□□ -0.63
DUSP3-201ENST00000226004 RNMTO43148 476 aaKnown RBP11.14□□□□□ -0.63
DUSP3-201ENST00000226004 KSR2Q6VAB6 950 aa11.14□□□□□ -0.63
DUSP3-201ENST00000226004 UNC5CLQ8IV45 518 aa11.14□□□□□ -0.63
DUSP3-201ENST00000226004 TRIM5Q9C035 493 aa11.14□□□□□ -0.63
DUSP3-201ENST00000226004 GOLGA6L19H0YKK7 550 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 GRM8O00222 908 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 PSMA5P28066 241 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 TNNT3P45378 269 aaPredicted RBP11.13□□□□□ -0.63
DUSP3-201ENST00000226004 KIAA0232Q92628 1395 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 IQSEC2Q5JU85 1478 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 KIAA1210Q9ULL0 1709 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 ADCY5O95622 1261 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
DUSP3-201ENST00000226004 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 PALD1Q9ULE6 856 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 HCLS1P14317 486 aaPredicted RBP11.13□□□□□ -0.63
DUSP3-201ENST00000226004 ZNF445P59923 1031 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
DUSP3-201ENST00000226004 NOLC1Q14978 699 aaKnown RBP eCLIP11.13□□□□□ -0.63
DUSP3-201ENST00000226004 NDUFB9Q9Y6M9 179 aa11.13□□□□□ -0.63
DUSP3-201ENST00000226004 GTF2E1P29083 439 aaPredicted RBP11.12□□□□□ -0.63
DUSP3-201ENST00000226004 LMBRD1Q9NUN5 540 aa11.12□□□□□ -0.63
DUSP3-201ENST00000226004 CDK12Q9NYV4 1490 aaPredicted RBP11.12□□□□□ -0.63
DUSP3-201ENST00000226004 IFNL2Q8IZJ0 200 aa11.12□□□□□ -0.63
DUSP3-201ENST00000226004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
DUSP3-201ENST00000226004 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
DUSP3-201ENST00000226004 BECN2A8MW95 431 aa11.12□□□□□ -0.63
DUSP3-201ENST00000226004 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
DUSP3-201ENST00000226004 STK11IPQ8N1F8 1099 aa11.12□□□□□ -0.63
DUSP3-201ENST00000226004 TPD52L1Q16890 204 aaPredicted RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 ARHGEF10O15013 1369 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 PLEKHG1Q9ULL1 1385 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 MYOM1P52179 1685 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 CPS1P31327 1500 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 DDX46Q7L014 1031 aaKnown RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 CCDC94Q9BW85 323 aaPredicted RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 BICC1Q9H694 974 aaKnown RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 C17orf53Q8N3J3 647 aaPredicted RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 CPLX1O14810 134 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 LETM1O95202 739 aaPredicted RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 TERF1P54274 439 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 SMAP1Q8IYB5 467 aaPredicted RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
DUSP3-201ENST00000226004 FMNL2Q96PY5 1086 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 LRRC2Q9BYS8 371 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
DUSP3-201ENST00000226004 CPSF1Q10570 1443 aaKnown RBP11.1□□□□□ -0.63
DUSP3-201ENST00000226004 HIP1O00291 1037 aa11.1□□□□□ -0.63
DUSP3-201ENST00000226004 LINS1Q8NG48 757 aa11.1□□□□□ -0.63
DUSP3-201ENST00000226004 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
DUSP3-201ENST00000226004 CGNQ9P2M7 1197 aaKnown RBP11.1□□□□□ -0.63
DUSP3-201ENST00000226004 TFIP11Q9UBB9 837 aaKnown RBP11.1□□□□□ -0.63
DUSP3-201ENST00000226004 CAMK4Q16566 473 aa11.1□□□□□ -0.63
DUSP3-201ENST00000226004 CCDC57Q2TAC2 916 aa11.1□□□□□ -0.63
DUSP3-201ENST00000226004 NLRP1Q9C000 1473 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 TPM3P06753 285 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 GPTP24298 496 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 PPLO60437 1756 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 ZC3H13Q5T200 1668 aaKnown RBP11.09□□□□□ -0.63
DUSP3-201ENST00000226004 CD163L1Q9NR16 1453 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
DUSP3-201ENST00000226004 AK2P54819 239 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 LMBR1LQ6UX01 489 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 EVI5LQ96CN4 794 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 EDC3Q96F86 508 aaKnown RBP11.09□□□□□ -0.63
DUSP3-201ENST00000226004 C19orf44Q9H6X5 657 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
DUSP3-201ENST00000226004 ZNF500O60304 480 aaPredicted RBP11.09□□□□□ -0.63
DUSP3-201ENST00000226004 CCDC192P0DO97 292 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms