RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 ERVV-1B6SEH8 477 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 F6X3S4 739 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 GNPATO15228 680 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 PANK1Q8TE04 598 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 CLUAP1Q96AJ1 413 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 AK7Q96M32 723 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 NUP98P52948 1817 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
SEC61B-201ENST00000223641 ATP10DQ9P241 1426 aa17.83■□□□□ 0.45
SEC61B-201ENST00000223641 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.45
SEC61B-201ENST00000223641 A0A087WZG4 1122 aa17.83■□□□□ 0.44
SEC61B-201ENST00000223641 RGL2O15211 777 aa17.83■□□□□ 0.44
SEC61B-201ENST00000223641 ADRA2BP18089 450 aa17.83■□□□□ 0.44
SEC61B-201ENST00000223641 SSFA2P28290 1259 aa17.83■□□□□ 0.44
SEC61B-201ENST00000223641 RIC3Q7Z5B4 369 aa17.83■□□□□ 0.44
SEC61B-201ENST00000223641 DZIP3Q86Y13 1208 aaKnown RBP17.83■□□□□ 0.44
SEC61B-201ENST00000223641 MAP3K2Q9Y2U5 619 aa17.83■□□□□ 0.44
SEC61B-201ENST00000223641 ZNF827Q17R98 1081 aa17.82■□□□□ 0.44
SEC61B-201ENST00000223641 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
SEC61B-201ENST00000223641 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
SEC61B-201ENST00000223641 METTL22Q9BUU2 404 aaPredicted RBP17.82■□□□□ 0.44
SEC61B-201ENST00000223641 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
SEC61B-201ENST00000223641 ANKRD36CQ5JPF3 1778 aa17.81■□□□□ 0.44
SEC61B-201ENST00000223641 SCN7AQ01118 1682 aa17.81■□□□□ 0.44
SEC61B-201ENST00000223641 CAMTA2O94983 1202 aa17.81■□□□□ 0.44
SEC61B-201ENST00000223641 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
SEC61B-201ENST00000223641 BEND3Q5T5X7 828 aa17.81■□□□□ 0.44
SEC61B-201ENST00000223641 GIGYF2Q6Y7W6 1299 aaKnown RBP17.81■□□□□ 0.44
SEC61B-201ENST00000223641 KIF6Q6ZMV9 814 aa17.81■□□□□ 0.44
SEC61B-201ENST00000223641 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
SEC61B-201ENST00000223641 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
SEC61B-201ENST00000223641 NARFQ9UHQ1 456 aa17.81■□□□□ 0.44
SEC61B-201ENST00000223641 TBC1D2BQ9UPU7 963 aa17.81■□□□□ 0.44
SEC61B-201ENST00000223641 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
SEC61B-201ENST00000223641 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
SEC61B-201ENST00000223641 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
SEC61B-201ENST00000223641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.79■□□□□ 0.44
SEC61B-201ENST00000223641 SLC15A2Q16348 729 aa17.79■□□□□ 0.44
SEC61B-201ENST00000223641 HLFQ16534 295 aa17.79■□□□□ 0.44
SEC61B-201ENST00000223641 SLC4A10Q6U841 1118 aa17.79■□□□□ 0.44
SEC61B-201ENST00000223641 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
SEC61B-201ENST00000223641 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
SEC61B-201ENST00000223641 LINS1Q8NG48 757 aa17.79■□□□□ 0.44
SEC61B-201ENST00000223641 ANO8Q9HCE9 1232 aaPredicted RBP17.79■□□□□ 0.44
SEC61B-201ENST00000223641 COG6Q9Y2V7 657 aa17.79■□□□□ 0.44
SEC61B-201ENST00000223641 IGKV5-2P06315 115 aa17.78■□□□□ 0.44
SEC61B-201ENST00000223641 TRIM28Q13263 835 aaKnown RBP17.78■□□□□ 0.44
SEC61B-201ENST00000223641 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
SEC61B-201ENST00000223641 FLAD1Q8NFF5 587 aa17.78■□□□□ 0.44
SEC61B-201ENST00000223641 CRBNQ96SW2 442 aa17.78■□□□□ 0.44
SEC61B-201ENST00000223641 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
SEC61B-201ENST00000223641 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
SEC61B-201ENST00000223641 USP42Q9H9J4 1324 aaKnown RBP17.77■□□□□ 0.44
SEC61B-201ENST00000223641 ALDH1L1O75891 902 aa17.77■□□□□ 0.44
SEC61B-201ENST00000223641 IRX6P78412 446 aaPredicted RBP17.77■□□□□ 0.44
SEC61B-201ENST00000223641 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
SEC61B-201ENST00000223641 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
SEC61B-201ENST00000223641 TFCP2L1Q9NZI6 479 aa17.77■□□□□ 0.44
SEC61B-201ENST00000223641 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.43
SEC61B-201ENST00000223641 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
SEC61B-201ENST00000223641 ZBTB7BO15156 539 aaPredicted RBP17.76■□□□□ 0.43
SEC61B-201ENST00000223641 NEFLP07196 543 aa17.76■□□□□ 0.43
SEC61B-201ENST00000223641 RFC4P35249 363 aa17.76■□□□□ 0.43
SEC61B-201ENST00000223641 NEXNQ0ZGT2 675 aa17.76■□□□□ 0.43
SEC61B-201ENST00000223641 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
SEC61B-201ENST00000223641 MYD88Q99836 296 aa17.76■□□□□ 0.43
SEC61B-201ENST00000223641 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
SEC61B-201ENST00000223641 PNPLA7Q6ZV29 1317 aa17.75■□□□□ 0.43
SEC61B-201ENST00000223641 PHF14O94880 888 aa17.75■□□□□ 0.43
SEC61B-201ENST00000223641 CWF19L2Q2TBE0 894 aaKnown RBP17.75■□□□□ 0.43
SEC61B-201ENST00000223641 ITPRIPQ8IWB1 547 aa17.75■□□□□ 0.43
SEC61B-201ENST00000223641 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
SEC61B-201ENST00000223641 ARXQ96QS3 562 aa17.75■□□□□ 0.43
SEC61B-201ENST00000223641 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
SEC61B-201ENST00000223641 ZPR1O75312 459 aa17.74■□□□□ 0.43
SEC61B-201ENST00000223641 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
SEC61B-201ENST00000223641 USPL1Q5W0Q7 1092 aa17.74■□□□□ 0.43
SEC61B-201ENST00000223641 COL23A1Q86Y22 540 aaPredicted RBP17.74■□□□□ 0.43
SEC61B-201ENST00000223641 CCDC191Q8NCU4 936 aa17.74■□□□□ 0.43
SEC61B-201ENST00000223641 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
SEC61B-201ENST00000223641 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
SEC61B-201ENST00000223641 UTYO14607 1347 aa17.73■□□□□ 0.43
SEC61B-201ENST00000223641 AAMPQ13685 434 aa17.73■□□□□ 0.43
SEC61B-201ENST00000223641 GCKRQ14397 625 aa17.73■□□□□ 0.43
SEC61B-201ENST00000223641 USP44Q9H0E7 712 aa17.73■□□□□ 0.43
SEC61B-201ENST00000223641 ZBTB40Q9NUA8 1239 aa17.73■□□□□ 0.43
SEC61B-201ENST00000223641 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
SEC61B-201ENST00000223641 GYS1P13807 737 aa17.72■□□□□ 0.43
SEC61B-201ENST00000223641 FKBP8Q14318 412 aa17.72■□□□□ 0.43
SEC61B-201ENST00000223641 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
SEC61B-201ENST00000223641 COL24A1Q17RW2 1714 aa17.72■□□□□ 0.43
SEC61B-201ENST00000223641 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
SEC61B-201ENST00000223641 NLRP10Q86W26 655 aa17.71■□□□□ 0.43
SEC61B-201ENST00000223641 MEIS3Q99687 375 aa17.71■□□□□ 0.43
SEC61B-201ENST00000223641 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
SEC61B-201ENST00000223641 PARP10Q53GL7 1025 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms