RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ATP5J2-PTCD1G3V325 749 aa17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 SGSM2O43147 1006 aa17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 PTCD1O75127 700 aaKnown RBP17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 AK2P54819 239 aa17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 HSP90AA2PQ14568 343 aaPredicted RBP17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 BEND3Q5T5X7 828 aa17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 R3HCC1Q9Y3T6 440 aaKnown RBP17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 STX6O43752 255 aa17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 INTS4Q96HW7 963 aaKnown RBP17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 ZSCAN31Q96LW9 406 aaPredicted RBP17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 TCEANC2Q96MN5 208 aa17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 ARID3AQ99856 593 aa17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 CCDC39Q9UFE4 941 aa17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 NFATC2IPQ8NCF5 419 aa17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 STAP2Q9UGK3 403 aa17.87■□□□□ 0.45
UBE2D4-201ENST00000222402 BICD2Q8TD16 824 aa17.86■□□□□ 0.45
UBE2D4-201ENST00000222402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.86■□□□□ 0.45
UBE2D4-201ENST00000222402 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
UBE2D4-201ENST00000222402 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
UBE2D4-201ENST00000222402 CABLES1Q8TDN4 633 aa17.86■□□□□ 0.45
UBE2D4-201ENST00000222402 TTC41PQ6P2S7 1318 aa17.86■□□□□ 0.45
UBE2D4-201ENST00000222402 PDCP20941 246 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 GJB2P29033 226 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 EVA1CP58658 441 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 NECAB1Q8N987 351 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 RBSNQ9H1K0 784 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 AOX1Q06278 1338 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 KDRP35968 1356 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 PROSER3Q2NL68 480 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 USP48Q86UV5 1035 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 KLHDC4Q8TBB5 520 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 SNX14Q9Y5W7 946 aa17.85■□□□□ 0.45
UBE2D4-201ENST00000222402 A0A087WZG4 1122 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 HSPA4P34932 840 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 RBM8AQ9Y5S9 174 aaKnown RBP17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 RAD50Q92878 1312 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 ITSN1Q15811 1721 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 DDIT3P35638 169 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 ANKRD13DQ6ZTN6 518 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 DDX21Q9NR30 783 aaKnown RBP eCLIP17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 TOM1L2Q6ZVM7 507 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 IFNL2Q8IZJ0 200 aa17.84■□□□□ 0.45
UBE2D4-201ENST00000222402 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.45
UBE2D4-201ENST00000222402 ZSCAN22P10073 491 aaPredicted RBP17.83■□□□□ 0.44
UBE2D4-201ENST00000222402 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.44
UBE2D4-201ENST00000222402 TMEM63CQ9P1W3 806 aa17.83■□□□□ 0.44
UBE2D4-201ENST00000222402 BRD1O95696 1058 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 ANKRD1Q15327 319 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 SUCLG2Q96I99 432 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 PRDM11Q9NQV5 511 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 KIF3AQ9Y496 699 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 ZNF445P59923 1031 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 KRT85P78386 507 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 NMIQ13287 307 aaPredicted RBP17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 STRN4Q9NRL3 753 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
UBE2D4-201ENST00000222402 GPT2Q8TD30 523 aa17.81■□□□□ 0.44
UBE2D4-201ENST00000222402 FMNL2Q96PY5 1086 aa17.81■□□□□ 0.44
UBE2D4-201ENST00000222402 LETM1O95202 739 aaPredicted RBP17.81■□□□□ 0.44
UBE2D4-201ENST00000222402 RGS12O14924 1447 aa17.81■□□□□ 0.44
UBE2D4-201ENST00000222402 ZNF790Q6PG37 636 aa17.81■□□□□ 0.44
UBE2D4-201ENST00000222402 SNRPA1P09661 255 aaKnown RBP17.81■□□□□ 0.44
UBE2D4-201ENST00000222402 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
UBE2D4-201ENST00000222402 SYT1P21579 422 aa17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 CEBPZQ03701 1054 aaKnown RBP17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 WASHC4Q2M389 1173 aa17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 CHAF1AQ13111 956 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 RASEFQ8IZ41 740 aa17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 CEP170BQ9Y4F5 1589 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 DDX17Q92841 729 aaKnown RBP17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 FAM227BQ96M60 508 aa17.8■□□□□ 0.44
UBE2D4-201ENST00000222402 GOLGA6L6A8MZA4 724 aa17.79■□□□□ 0.44
UBE2D4-201ENST00000222402 ARHGEF25Q86VW2 580 aa17.79■□□□□ 0.44
UBE2D4-201ENST00000222402 ANKARQ7Z5J8 1434 aa17.79■□□□□ 0.44
UBE2D4-201ENST00000222402 USP25Q9UHP3 1055 aa17.79■□□□□ 0.44
UBE2D4-201ENST00000222402 FAM13BQ9NYF5 915 aa17.79■□□□□ 0.44
UBE2D4-201ENST00000222402 GADD45BO75293 160 aaPredicted RBP17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 CCDC171Q6TFL3 1326 aa17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 F13A1P00488 732 aa17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 PTH1RQ03431 593 aa17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 POLA2Q14181 598 aa17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 SF3A1Q15459 793 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 CREB3L3Q68CJ9 461 aa17.78■□□□□ 0.44
UBE2D4-201ENST00000222402 DNM1Q05193 864 aaKnown RBP17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 GNL2Q13823 731 aaKnown RBP17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 PI4K2BQ8TCG2 481 aa17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 UBE2HP62256 183 aa17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
UBE2D4-201ENST00000222402 SYTL4Q96C24 671 aaPredicted RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms