RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 EDC4Q6P2E9 1401 aaKnown RBP24.42■■□□□ 1.5
FMR1-201ENST00000218200 SFPQP23246 707 aaKnown RBP eCLIP24.42■■□□□ 1.5
FMR1-201ENST00000218200 FLIIQ13045 1269 aa24.41■■□□□ 1.5
FMR1-201ENST00000218200 LRRC2Q9BYS8 371 aa24.41■■□□□ 1.5
FMR1-201ENST00000218200 ZC3H6P61129 1189 aaKnown RBP24.41■■□□□ 1.5
FMR1-201ENST00000218200 ABCA6Q8N139 1617 aa24.4■■□□□ 1.5
FMR1-201ENST00000218200 TRIM34Q9BYJ4 488 aa24.4■■□□□ 1.5
FMR1-201ENST00000218200 HSP90AA4PQ58FG1 418 aa24.4■■□□□ 1.5
FMR1-201ENST00000218200 ACBD3Q9H3P7 528 aa24.4■■□□□ 1.5
FMR1-201ENST00000218200 ZSWIM4Q9H7M6 989 aa24.4■■□□□ 1.5
FMR1-201ENST00000218200 LRSAM1Q6UWE0 723 aa24.4■■□□□ 1.5
FMR1-201ENST00000218200 PTPRCP08575 1304 aa24.4■■□□□ 1.5
FMR1-201ENST00000218200 ZBTB7BO15156 539 aaPredicted RBP24.39■■□□□ 1.5
FMR1-201ENST00000218200 TSPYL1Q9H0U9 437 aa24.39■■□□□ 1.5
FMR1-201ENST00000218200 CNNM1Q9NRU3 951 aa24.39■■□□□ 1.5
FMR1-201ENST00000218200 FILIP1LQ4L180 1135 aa24.39■■□□□ 1.5
FMR1-201ENST00000218200 LEKR1Q6ZMV7 388 aa24.39■■□□□ 1.5
FMR1-201ENST00000218200 USP48Q86UV5 1035 aa24.39■■□□□ 1.5
FMR1-201ENST00000218200 OTUD7AQ8TE49 926 aaPredicted RBP24.39■■□□□ 1.5
FMR1-201ENST00000218200 MTHFSDQ2M296 383 aaKnown RBP24.39■■□□□ 1.49
FMR1-201ENST00000218200 TTC39AQ5SRH9 613 aa24.39■■□□□ 1.49
FMR1-201ENST00000218200 PPFIBP1Q86W92 1011 aa24.39■■□□□ 1.49
FMR1-201ENST00000218200 TBC1D2BQ9UPU7 963 aa24.39■■□□□ 1.49
FMR1-201ENST00000218200 AK7Q96M32 723 aa24.38■■□□□ 1.49
FMR1-201ENST00000218200 MPRIPQ6WCQ1 1025 aa24.38■■□□□ 1.49
FMR1-201ENST00000218200 PPP1R42Q7Z4L9 355 aa24.38■■□□□ 1.49
FMR1-201ENST00000218200 CCDC102AQ96A19 550 aa24.38■■□□□ 1.49
FMR1-201ENST00000218200 CPLX3Q8WVH0 158 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 NOLC1Q14978 699 aaKnown RBP eCLIP24.37■■□□□ 1.49
FMR1-201ENST00000218200 CCDC186Q7Z3E2 898 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 MAP3K19Q56UN5 1328 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 METP08581 1390 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 IDH1O75874 414 aaKnown RBP24.37■■□□□ 1.49
FMR1-201ENST00000218200 CCDC158Q5M9N0 1113 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 JMYQ8N9B5 988 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 SCAND2PQ9GZW5 306 aaPredicted RBP24.37■■□□□ 1.49
FMR1-201ENST00000218200 C17orf53Q8N3J3 647 aaPredicted RBP24.37■■□□□ 1.49
FMR1-201ENST00000218200 KIF18AQ8NI77 898 aa24.37■■□□□ 1.49
FMR1-201ENST00000218200 PTCD1O75127 700 aaKnown RBP24.36■■□□□ 1.49
FMR1-201ENST00000218200 ZKSCAN5Q9Y2L8 839 aa24.36■■□□□ 1.49
FMR1-201ENST00000218200 SART3Q15020 963 aaKnown RBP24.36■■□□□ 1.49
FMR1-201ENST00000218200 CENPHQ9H3R5 247 aa24.36■■□□□ 1.49
FMR1-201ENST00000218200 STRN4Q9NRL3 753 aa24.36■■□□□ 1.49
FMR1-201ENST00000218200 INO80Q9ULG1 1556 aaPredicted RBP24.36■■□□□ 1.49
FMR1-201ENST00000218200 CPA1P15085 419 aa24.35■■□□□ 1.49
FMR1-201ENST00000218200 IBSPP21815 317 aaPredicted RBP24.35■■□□□ 1.49
FMR1-201ENST00000218200 RAB3GAP1Q15042 981 aa24.35■■□□□ 1.49
FMR1-201ENST00000218200 NOM1Q5C9Z4 860 aaKnown RBP24.35■■□□□ 1.49
FMR1-201ENST00000218200 PDE1AP54750 535 aa24.35■■□□□ 1.49
FMR1-201ENST00000218200 CWC15Q9P013 229 aaKnown RBP24.35■■□□□ 1.49
FMR1-201ENST00000218200 CHAMP1Q96JM3 812 aa24.35■■□□□ 1.49
FMR1-201ENST00000218200 DNM1Q05193 864 aaKnown RBP24.34■■□□□ 1.49
FMR1-201ENST00000218200 KCNH5Q8NCM2 988 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 EYA1Q99502 592 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 CEP126Q9P2H0 1117 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 PI4KAP2A4QPH2 592 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 POLR3DP05423 398 aaPredicted RBP24.34■■□□□ 1.49
FMR1-201ENST00000218200 XBP1P17861 261 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 LTKP29376 864 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 PI4KAP1Q8N8J0 262 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 ADGRB3O60242 1522 aa24.34■■□□□ 1.49
FMR1-201ENST00000218200 CEP152O94986 1710 aa24.33■■□□□ 1.49
FMR1-201ENST00000218200 GTF2F1P35269 517 aaKnown RBP eCLIP24.33■■□□□ 1.49
FMR1-201ENST00000218200 TMCO3Q6UWJ1 677 aa24.33■■□□□ 1.49
FMR1-201ENST00000218200 RBSNQ9H1K0 784 aa24.33■■□□□ 1.49
FMR1-201ENST00000218200 SNRKQ9NRH2 765 aa24.33■■□□□ 1.49
FMR1-201ENST00000218200 ARHGAP31Q2M1Z3 1444 aa24.33■■□□□ 1.49
FMR1-201ENST00000218200 FSIP1Q8NA03 581 aa24.33■■□□□ 1.48
FMR1-201ENST00000218200 TSC1Q92574 1164 aa24.33■■□□□ 1.48
FMR1-201ENST00000218200 PPRC1Q5VV67 1664 aaKnown RBP24.32■■□□□ 1.48
FMR1-201ENST00000218200 HAND2P61296 217 aa24.32■■□□□ 1.48
FMR1-201ENST00000218200 ANKRD44Q8N8A2 993 aa24.32■■□□□ 1.48
FMR1-201ENST00000218200 KCNA6P17658 529 aa24.31■■□□□ 1.48
FMR1-201ENST00000218200 BRMS1Q9HCU9 246 aa24.31■■□□□ 1.48
FMR1-201ENST00000218200 NOL10Q9BSC4 688 aaKnown RBP24.31■■□□□ 1.48
FMR1-201ENST00000218200 TMX4Q9H1E5 349 aaPredicted RBP24.31■■□□□ 1.48
FMR1-201ENST00000218200 DYNC1I1O14576 645 aa24.31■■□□□ 1.48
FMR1-201ENST00000218200 SMARCE1Q969G3 411 aa24.31■■□□□ 1.48
FMR1-201ENST00000218200 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
FMR1-201ENST00000218200 TMEM2Q9UHN6 1383 aa24.3■■□□□ 1.48
FMR1-201ENST00000218200 UBE2HP62256 183 aa24.3■■□□□ 1.48
FMR1-201ENST00000218200 CCDC57Q2TAC2 916 aa24.3■■□□□ 1.48
FMR1-201ENST00000218200 TRIM22Q8IYM9 498 aa24.3■■□□□ 1.48
FMR1-201ENST00000218200 ARHGAP29Q52LW3 1261 aa24.3■■□□□ 1.48
FMR1-201ENST00000218200 DACT1Q9NYF0 836 aa24.3■■□□□ 1.48
FMR1-201ENST00000218200 TMC6Q7Z403 805 aa24.29■■□□□ 1.48
FMR1-201ENST00000218200 AMOTL1Q8IY63 956 aa24.29■■□□□ 1.48
FMR1-201ENST00000218200 TBX22Q9Y458 520 aa24.29■■□□□ 1.48
FMR1-201ENST00000218200 DNAAF4Q8WXU2 420 aa24.29■■□□□ 1.48
FMR1-201ENST00000218200 FLT4P35916 1363 aa24.29■■□□□ 1.48
FMR1-201ENST00000218200 LMTK2Q8IWU2 1503 aa24.29■■□□□ 1.48
FMR1-201ENST00000218200 CCDC144CPQ8IYA2 1237 aa24.29■■□□□ 1.48
FMR1-201ENST00000218200 KRT32Q14532 448 aa24.28■■□□□ 1.48
FMR1-201ENST00000218200 FAM173BQ6P4H8 233 aa24.28■■□□□ 1.48
FMR1-201ENST00000218200 SNX21Q969T3 373 aa24.28■■□□□ 1.48
FMR1-201ENST00000218200 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
FMR1-201ENST00000218200 ANO10Q9NW15 660 aa24.28■■□□□ 1.48
FMR1-201ENST00000218200 CABP4P57796 275 aa24.28■■□□□ 1.48
FMR1-201ENST00000218200 MYD88Q99836 296 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms