RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 SLC5A1P13866 664 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 HCLS1P14317 486 aaPredicted RBP13.97□□□□□ -0.17
TRO-201ENST00000173898 CNNM3Q8NE01 707 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 ZNF287Q9HBT7 754 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 TRMT1Q9NXH9 659 aaKnown RBP13.97□□□□□ -0.17
TRO-201ENST00000173898 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
TRO-201ENST00000173898 KDM5BQ9UGL1 1544 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 CENPHQ9H3R5 247 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 ZSCAN12O43309 604 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 NECAB1Q8N987 351 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 ZNF76P36508 570 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
TRO-201ENST00000173898 ANKRD24Q8TF21 1146 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 BRF1Q92994 677 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 C16orf45Q96MC5 204 aaPredicted RBP13.97□□□□□ -0.17
TRO-201ENST00000173898 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
TRO-201ENST00000173898 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
TRO-201ENST00000173898 CWC25Q9NXE8 425 aaPredicted RBP13.97□□□□□ -0.17
TRO-201ENST00000173898 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.17
TRO-201ENST00000173898 FAM193AP78312 1265 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 TSPYL6Q8N831 410 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
TRO-201ENST00000173898 TNNT1P13805 278 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 CCDC102AQ96A19 550 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 ESYT1Q9BSJ8 1104 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 HMG20BQ9P0W2 317 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
TRO-201ENST00000173898 VAMP4O75379 141 aa13.96□□□□□ -0.18
TRO-201ENST00000173898 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.18
TRO-201ENST00000173898 TMCO3Q6UWJ1 677 aa13.96□□□□□ -0.18
TRO-201ENST00000173898 MICU3Q86XE3 530 aa13.96□□□□□ -0.18
TRO-201ENST00000173898 DZIP1Q86YF9 867 aaKnown RBP13.96□□□□□ -0.18
TRO-201ENST00000173898 RAB11FIP4Q86YS3 637 aa13.96□□□□□ -0.18
TRO-201ENST00000173898 SEPT11Q9NVA2 429 aaKnown RBP13.96□□□□□ -0.18
TRO-201ENST00000173898 ZSCAN23Q3MJ62 389 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 PANK2Q9BZ23 570 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 ATP10BO94823 1461 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
TRO-201ENST00000173898 SSRP1Q08945 709 aaKnown RBP13.95□□□□□ -0.18
TRO-201ENST00000173898 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
TRO-201ENST00000173898 EIF4A2Q14240 407 aaKnown RBP13.95□□□□□ -0.18
TRO-201ENST00000173898 CHRNA2Q15822 529 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 CCDC191Q8NCU4 936 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 ZPR1O75312 459 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 ATP8B2P98198 1209 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 IQCEQ6IPM2 695 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
TRO-201ENST00000173898 ZSCAN22P10073 491 aaPredicted RBP13.94□□□□□ -0.18
TRO-201ENST00000173898 KIF4BQ2VIQ3 1234 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 CPLX3Q8WVH0 158 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 UGGT2Q9NYU1 1516 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 ZNF444Q8N0Y2 327 aaPredicted RBP13.94□□□□□ -0.18
TRO-201ENST00000173898 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 NEFHP12036 1026 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
TRO-201ENST00000173898 MPHOSPH10O00566 681 aaKnown RBP13.94□□□□□ -0.18
TRO-201ENST00000173898 TMEM67Q5HYA8 995 aa13.94□□□□□ -0.18
TRO-201ENST00000173898 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
TRO-201ENST00000173898 NUP160Q12769 1436 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 ADAMTS2O95450 1211 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRO-201ENST00000173898 XAGE3Q8WTP9 111 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 LRRC2Q9BYS8 371 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 ZBTB40Q9NUA8 1239 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 RBM8AQ9Y5S9 174 aaKnown RBP13.93□□□□□ -0.18
TRO-201ENST00000173898 CCDC194A0A1B0GVG4 234 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 NLRP5P59047 1200 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 ANAPC15P60006 121 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 SMC5Q8IY18 1101 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 SNX21Q969T3 373 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 DCTPP1Q9H773 170 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 EXOC5O00471 708 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 KIF5CO60282 957 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 STX1AQ16623 288 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 TAF4BQ92750 862 aa13.93□□□□□ -0.18
TRO-201ENST00000173898 MCM5P33992 734 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 SPA17Q15506 151 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 ISM2Q6H9L7 571 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
TRO-201ENST00000173898 CCDC148Q8NFR7 591 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 PHF23Q9BUL5 403 aaPredicted RBP13.92□□□□□ -0.18
TRO-201ENST00000173898 TTF1Q15361 905 aaPredicted RBP13.92□□□□□ -0.18
TRO-201ENST00000173898 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 PLCH2O75038 1416 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 GRM8O00222 908 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 NEMFO60524 1076 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
TRO-201ENST00000173898 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 TTC21AQ8NDW8 1320 aa13.92□□□□□ -0.18
TRO-201ENST00000173898 SEC24BO95487 1268 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms