RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
PDZD4-201ENST00000164640 ERO1AQ96HE7 468 aa17.75■□□□□ 0.43
PDZD4-201ENST00000164640 FOXO3O43524 673 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 FLIIQ13045 1269 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 FUCA2Q9BTY2 467 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 ATP10DQ9P241 1426 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 SGSM2O43147 1006 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
PDZD4-201ENST00000164640 HNRNPH2P55795 449 aaKnown RBP17.74■□□□□ 0.43
PDZD4-201ENST00000164640 ME3Q16798 604 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 LRRC8AQ8IWT6 810 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
PDZD4-201ENST00000164640 KINO60870 393 aaKnown RBP17.73■□□□□ 0.43
PDZD4-201ENST00000164640 ATP8B2P98198 1209 aa17.73■□□□□ 0.43
PDZD4-201ENST00000164640 GPS2Q13227 327 aa17.73■□□□□ 0.43
PDZD4-201ENST00000164640 SKIDA1Q1XH10 827 aa17.73■□□□□ 0.43
PDZD4-201ENST00000164640 PPP1R42Q7Z4L9 355 aa17.73■□□□□ 0.43
PDZD4-201ENST00000164640 URI1O94763 535 aaPredicted RBP17.73■□□□□ 0.43
PDZD4-201ENST00000164640 C10orf67Q8IYJ2 551 aa17.73■□□□□ 0.43
PDZD4-201ENST00000164640 SH2B1Q9NRF2 756 aaPredicted RBP17.73■□□□□ 0.43
PDZD4-201ENST00000164640 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
PDZD4-201ENST00000164640 MYOM2P54296 1465 aa17.73■□□□□ 0.43
PDZD4-201ENST00000164640 IDI1Q13907 227 aa17.73■□□□□ 0.43
PDZD4-201ENST00000164640 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
PDZD4-201ENST00000164640 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
PDZD4-201ENST00000164640 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
PDZD4-201ENST00000164640 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
PDZD4-201ENST00000164640 CCDC34Q96HJ3 373 aa17.72■□□□□ 0.43
PDZD4-201ENST00000164640 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
PDZD4-201ENST00000164640 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
PDZD4-201ENST00000164640 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
PDZD4-201ENST00000164640 HYPKQ9NX55 129 aa17.71■□□□□ 0.43
PDZD4-201ENST00000164640 FAM135BQ49AJ0 1406 aa17.71■□□□□ 0.43
PDZD4-201ENST00000164640 LRRC7Q96NW7 1537 aa17.71■□□□□ 0.42
PDZD4-201ENST00000164640 TCHHQ07283 1943 aa17.71■□□□□ 0.42
PDZD4-201ENST00000164640 ADGRB2O60241 1585 aa17.71■□□□□ 0.42
PDZD4-201ENST00000164640 ME1P48163 572 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 PTH1RQ03431 593 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 CLASRPQ8N2M8 674 aaKnown RBP17.7■□□□□ 0.42
PDZD4-201ENST00000164640 LTV1Q96GA3 475 aaPredicted RBP17.7■□□□□ 0.42
PDZD4-201ENST00000164640 DNAI1Q9UI46 699 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 TPM4P67936 248 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 TMC6Q7Z403 805 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 KRBA2Q6ZNG9 492 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 AOPEPQ8N6M6 819 aa17.7■□□□□ 0.42
PDZD4-201ENST00000164640 CHL1O00533 1208 aa17.69■□□□□ 0.42
PDZD4-201ENST00000164640 SYCP1Q15431 976 aa17.69■□□□□ 0.42
PDZD4-201ENST00000164640 PAXIP1Q6ZW49 1069 aaPredicted RBP17.69■□□□□ 0.42
PDZD4-201ENST00000164640 LEO1Q8WVC0 666 aaPredicted RBP17.69■□□□□ 0.42
PDZD4-201ENST00000164640 BIN1O00499 593 aa17.69■□□□□ 0.42
PDZD4-201ENST00000164640 KIF24Q5T7B8 1368 aa17.69■□□□□ 0.42
PDZD4-201ENST00000164640 SFPQP23246 707 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDZD4-201ENST00000164640 GUCY1B3Q02153 619 aa17.69■□□□□ 0.42
PDZD4-201ENST00000164640 ISM2Q6H9L7 571 aa17.69■□□□□ 0.42
PDZD4-201ENST00000164640 CLSTN2Q9H4D0 955 aa17.69■□□□□ 0.42
PDZD4-201ENST00000164640 PSMA5P28066 241 aa17.68■□□□□ 0.42
PDZD4-201ENST00000164640 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.68■□□□□ 0.42
PDZD4-201ENST00000164640 KIF1BPQ96EK5 621 aa17.68■□□□□ 0.42
PDZD4-201ENST00000164640 SIL1Q9H173 461 aa17.68■□□□□ 0.42
PDZD4-201ENST00000164640 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
PDZD4-201ENST00000164640 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
PDZD4-201ENST00000164640 CEP57L1Q8IYX8 460 aa17.68■□□□□ 0.42
PDZD4-201ENST00000164640 NEMFO60524 1076 aa17.67■□□□□ 0.42
PDZD4-201ENST00000164640 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
PDZD4-201ENST00000164640 FSD1Q9BTV5 496 aa17.67■□□□□ 0.42
PDZD4-201ENST00000164640 RBM8AQ9Y5S9 174 aaKnown RBP17.67■□□□□ 0.42
PDZD4-201ENST00000164640 LMAN1P49257 510 aa17.67■□□□□ 0.42
PDZD4-201ENST00000164640 VPS53Q5VIR6 699 aa17.67■□□□□ 0.42
PDZD4-201ENST00000164640 CCAR1Q8IX12 1150 aaKnown RBP17.67■□□□□ 0.42
PDZD4-201ENST00000164640 LSG1Q9H089 658 aaKnown RBP17.67■□□□□ 0.42
PDZD4-201ENST00000164640 SHROOM2Q13796 1616 aa17.67■□□□□ 0.42
PDZD4-201ENST00000164640 C11orf57Q6ZUT1 292 aaPredicted RBP17.67■□□□□ 0.42
PDZD4-201ENST00000164640 QRICH2Q9H0J4 1663 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 HSP90AB2PQ58FF8 381 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 TTC14Q96N46 770 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 RSPH14Q9UHP6 348 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 STX1AQ16623 288 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 PLA2G4DQ86XP0 818 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 LRRC2Q9BYS8 371 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 NAT10Q9H0A0 1025 aaKnown RBP17.66■□□□□ 0.42
PDZD4-201ENST00000164640 ZSWIM4Q9H7M6 989 aa17.66■□□□□ 0.42
PDZD4-201ENST00000164640 SEC31AO94979 1220 aaKnown RBP17.66■□□□□ 0.42
PDZD4-201ENST00000164640 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
PDZD4-201ENST00000164640 TDRD7Q8NHU6 1098 aaKnown RBP17.66■□□□□ 0.42
PDZD4-201ENST00000164640 ZCCHC17Q9NP64 241 aaKnown RBP17.66■□□□□ 0.42
PDZD4-201ENST00000164640 CLCN6P51797 869 aa17.65■□□□□ 0.42
PDZD4-201ENST00000164640 EIF4A2Q14240 407 aaKnown RBP17.65■□□□□ 0.42
PDZD4-201ENST00000164640 GLRX3O76003 335 aaKnown RBP17.65■□□□□ 0.42
PDZD4-201ENST00000164640 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
PDZD4-201ENST00000164640 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
PDZD4-201ENST00000164640 BRF1Q92994 677 aa17.65■□□□□ 0.42
PDZD4-201ENST00000164640 C9orf78Q9NZ63 289 aaPredicted RBP17.65■□□□□ 0.42
PDZD4-201ENST00000164640 JAK2O60674 1132 aa17.64■□□□□ 0.41
PDZD4-201ENST00000164640 AACSQ86V21 672 aa17.64■□□□□ 0.41
PDZD4-201ENST00000164640 TSPYL1Q9H0U9 437 aa17.64■□□□□ 0.41
PDZD4-201ENST00000164640 CFAP45Q9UL16 551 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms