RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 PI4K2BQ8TCG2 481 aa23.87■■□□□ 1.41
PPP1R3F-201ENST00000055335 SPATA32Q96LK8 384 aa23.87■■□□□ 1.41
PPP1R3F-201ENST00000055335 RAB11FIP3O75154 756 aa23.86■■□□□ 1.41
PPP1R3F-201ENST00000055335 ZKSCAN1P17029 563 aaPredicted RBP23.86■■□□□ 1.41
PPP1R3F-201ENST00000055335 CLIP2Q9UDT6 1046 aa23.86■■□□□ 1.41
PPP1R3F-201ENST00000055335 A0A087WWV3 80 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 PPFIA3O75145 1194 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 MAPK8IP2Q13387 824 aaPredicted RBP23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 CDC42BPGQ6DT37 1551 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 KIF20AO95235 890 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 FILIP1Q7Z7B0 1213 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 DDX11Q96FC9 970 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 CPS1P31327 1500 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 PIK3C2BO00750 1634 aa23.85■■□□□ 1.41
PPP1R3F-201ENST00000055335 ZNF165P49910 485 aa23.84■■□□□ 1.41
PPP1R3F-201ENST00000055335 ARID5BQ14865 1188 aa23.84■■□□□ 1.41
PPP1R3F-201ENST00000055335 KIF1BPQ96EK5 621 aa23.84■■□□□ 1.41
PPP1R3F-201ENST00000055335 AATKQ6ZMQ8 1374 aa23.84■■□□□ 1.41
PPP1R3F-201ENST00000055335 SSH2Q76I76 1423 aa23.84■■□□□ 1.41
PPP1R3F-201ENST00000055335 TAF7Q15545 349 aaPredicted RBP23.84■■□□□ 1.41
PPP1R3F-201ENST00000055335 ANKRD7Q92527 254 aa23.84■■□□□ 1.41
PPP1R3F-201ENST00000055335 TPCN1Q9ULQ1 816 aa23.83■■□□□ 1.41
PPP1R3F-201ENST00000055335 PA2G4Q9UQ80 394 aaKnown RBP23.83■■□□□ 1.41
PPP1R3F-201ENST00000055335 TTC21BQ7Z4L5 1316 aa23.83■■□□□ 1.41
PPP1R3F-201ENST00000055335 KIF20BQ96Q89 1820 aa23.83■■□□□ 1.4
PPP1R3F-201ENST00000055335 ANKRD26Q9UPS8 1709 aa23.83■■□□□ 1.4
PPP1R3F-201ENST00000055335 ACEP12821 1306 aa23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 ERICH4A6NGS2 130 aa23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 ZSCAN25Q6NSZ9 544 aa23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 HECW2Q9P2P5 1572 aa23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 ZBTB22O15209 634 aa23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 ATP7BP35670 1465 aa23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 CACTINQ8WUQ7 758 aaKnown RBP23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 SYTL4Q96C24 671 aaPredicted RBP23.82■■□□□ 1.4
PPP1R3F-201ENST00000055335 RUFY2Q8WXA3 655 aa23.81■■□□□ 1.4
PPP1R3F-201ENST00000055335 PRR36Q9H6K5 1346 aa23.81■■□□□ 1.4
PPP1R3F-201ENST00000055335 IFIT2P09913 472 aaKnown RBP23.81■■□□□ 1.4
PPP1R3F-201ENST00000055335 GOLGA6L19H0YKK7 550 aa23.81■■□□□ 1.4
PPP1R3F-201ENST00000055335 CLASRPQ8N2M8 674 aaKnown RBP23.81■■□□□ 1.4
PPP1R3F-201ENST00000055335 SSH3Q8TE77 659 aa23.81■■□□□ 1.4
PPP1R3F-201ENST00000055335 CRB1P82279 1406 aa23.81■■□□□ 1.4
PPP1R3F-201ENST00000055335 NR1I2O75469 434 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 C14orf37Q86TY3 774 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 FAM227BQ96M60 508 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 EYA1Q99502 592 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 TAOK2Q9UL54 1235 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 LARP1Q6PKG0 1096 aaKnown RBP23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 USHBP1Q8N6Y0 703 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 OGFRQ9NZT2 677 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 ALKQ9UM73 1620 aa23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 RBM8AQ9Y5S9 174 aaKnown RBP23.8■■□□□ 1.4
PPP1R3F-201ENST00000055335 MLH3Q9UHC1 1453 aa23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 ZNF75DP51815 510 aa23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 ST3GAL1Q11201 340 aa23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 CCDC144BQ3MJ40 725 aa23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 CCDC144CPQ8IYA2 1237 aa23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 PI4KAP2A4QPH2 592 aa23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 CTIFO43310 598 aaKnown RBP23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 PI4KAP1Q8N8J0 262 aa23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 NAP1L2Q9ULW6 460 aaPredicted RBP23.79■■□□□ 1.4
PPP1R3F-201ENST00000055335 SMTNL1A8MU46 457 aa23.78■■□□□ 1.4
PPP1R3F-201ENST00000055335 VPS53Q5VIR6 699 aa23.78■■□□□ 1.4
PPP1R3F-201ENST00000055335 CEP135Q66GS9 1140 aa23.78■■□□□ 1.4
PPP1R3F-201ENST00000055335 ERCC4Q92889 916 aaPredicted RBP23.78■■□□□ 1.4
PPP1R3F-201ENST00000055335 BBXQ8WY36 941 aaPredicted RBP23.78■■□□□ 1.4
PPP1R3F-201ENST00000055335 ZSCAN31Q96LW9 406 aaPredicted RBP23.78■■□□□ 1.4
PPP1R3F-201ENST00000055335 SH2B1Q9NRF2 756 aaPredicted RBP23.78■■□□□ 1.4
PPP1R3F-201ENST00000055335 METP08581 1390 aa23.77■■□□□ 1.4
PPP1R3F-201ENST00000055335 USP27XA6NNY8 438 aa23.77■■□□□ 1.4
PPP1R3F-201ENST00000055335 GLRX3O76003 335 aaKnown RBP23.77■■□□□ 1.4
PPP1R3F-201ENST00000055335 CCDC8Q9H0W5 538 aaPredicted RBP23.77■■□□□ 1.4
PPP1R3F-201ENST00000055335 MYO5BQ9ULV0 1848 aa23.77■■□□□ 1.4
PPP1R3F-201ENST00000055335 BECN2A8MW95 431 aa23.77■■□□□ 1.39
PPP1R3F-201ENST00000055335 AACSQ86V21 672 aa23.77■■□□□ 1.39
PPP1R3F-201ENST00000055335 FEZ1Q99689 392 aa23.77■■□□□ 1.39
PPP1R3F-201ENST00000055335 CTNNA3Q9UI47 895 aa23.77■■□□□ 1.39
PPP1R3F-201ENST00000055335 GNAT3A8MTJ3 354 aa23.76■■□□□ 1.39
PPP1R3F-201ENST00000055335 HSP90B1P14625 803 aaKnown RBP23.76■■□□□ 1.39
PPP1R3F-201ENST00000055335 SIL1Q9H173 461 aa23.76■■□□□ 1.39
PPP1R3F-201ENST00000055335 CCDC9Q9Y3X0 531 aaKnown RBP23.76■■□□□ 1.39
PPP1R3F-201ENST00000055335 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
PPP1R3F-201ENST00000055335 FGD1P98174 961 aa23.76■■□□□ 1.39
PPP1R3F-201ENST00000055335 H3BQV1 296 aa23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 IFFO2Q5TF58 517 aa23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 CREB3L3Q68CJ9 461 aa23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 C9orf78Q9NZ63 289 aaPredicted RBP23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 ZNF215Q9UL58 517 aaPredicted RBP23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 TAF6LQ9Y6J9 622 aa23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 BLOC1S2Q6QNY1 142 aa23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 BOLA2Q9H3K6 86 aa23.75■■□□□ 1.39
PPP1R3F-201ENST00000055335 TRERF1Q96PN7 1200 aa23.74■■□□□ 1.39
PPP1R3F-201ENST00000055335 JAK2O60674 1132 aa23.74■■□□□ 1.39
PPP1R3F-201ENST00000055335 NGDNQ8NEJ9 315 aaKnown RBP23.74■■□□□ 1.39
PPP1R3F-201ENST00000055335 ZSWIM6Q9HCJ5 1215 aa23.74■■□□□ 1.39
PPP1R3F-201ENST00000055335 LEO1Q8WVC0 666 aaPredicted RBP23.74■■□□□ 1.39
PPP1R3F-201ENST00000055335 PTPN14Q15678 1187 aa23.73■■□□□ 1.39
PPP1R3F-201ENST00000055335 IL17REQ8NFR9 667 aa23.73■■□□□ 1.39
PPP1R3F-201ENST00000055335 LRRC2Q9BYS8 371 aa23.73■■□□□ 1.39
PPP1R3F-201ENST00000055335 CHPF2Q9P2E5 772 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms