RNA–Protein interactions for RNA: ENST00000011691.5

SS18L2-201, Transcript of SS18 like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L2, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-201ENST00000011691 CNBD1Q8NA66 436 aa20.67■□□□□ 0.9
SS18L2-201ENST00000011691 BRIP1Q9BX63 1249 aa20.67■□□□□ 0.9
SS18L2-201ENST00000011691 DICER1Q9UPY3 1922 aaKnown RBP20.66■□□□□ 0.9
SS18L2-201ENST00000011691 PDE6BP35913 854 aa20.66■□□□□ 0.9
SS18L2-201ENST00000011691 KDM2BQ8NHM5 1336 aa20.66■□□□□ 0.9
SS18L2-201ENST00000011691 NBPF26B4DH59 902 aa20.65■□□□□ 0.9
SS18L2-201ENST00000011691 NBPF10Q6P3W6 841 aaKnown RBP20.65■□□□□ 0.9
SS18L2-201ENST00000011691 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
SS18L2-201ENST00000011691 NBPF15Q8N660 670 aa20.65■□□□□ 0.9
SS18L2-201ENST00000011691 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
SS18L2-201ENST00000011691 RRAGCQ9HB90 399 aa20.65■□□□□ 0.9
SS18L2-201ENST00000011691 NUP98P52948 1817 aa20.64■□□□□ 0.9
SS18L2-201ENST00000011691 WDR90Q96KV7 1748 aa20.64■□□□□ 0.9
SS18L2-201ENST00000011691 NFKBIEO00221 500 aa20.64■□□□□ 0.89
SS18L2-201ENST00000011691 LMNB1P20700 586 aa20.64■□□□□ 0.89
SS18L2-201ENST00000011691 ST5P78524 1137 aa20.64■□□□□ 0.89
SS18L2-201ENST00000011691 PLEKHF1Q96S99 279 aa20.64■□□□□ 0.89
SS18L2-201ENST00000011691 C21orf2O43822 256 aa20.63■□□□□ 0.89
SS18L2-201ENST00000011691 MAPK8IP3Q9UPT6 1336 aa20.62■□□□□ 0.89
SS18L2-201ENST00000011691 FAM177BA6PVY3 158 aa20.62■□□□□ 0.89
SS18L2-201ENST00000011691 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
SS18L2-201ENST00000011691 NBPF5PQ86XG9 351 aaPredicted RBP20.62■□□□□ 0.89
SS18L2-201ENST00000011691 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
SS18L2-201ENST00000011691 NGEFQ8N5V2 710 aa20.61■□□□□ 0.89
SS18L2-201ENST00000011691 RNF39Q9H2S5 420 aa20.61■□□□□ 0.89
SS18L2-201ENST00000011691 PDZRN3Q9UPQ7 1066 aa20.6■□□□□ 0.89
SS18L2-201ENST00000011691 NIP7Q9Y221 180 aaKnown RBP eCLIP20.6■□□□□ 0.89
SS18L2-201ENST00000011691 APLP1P51693 650 aa20.59■□□□□ 0.89
SS18L2-201ENST00000011691 CLEC4GQ6UXB4 293 aa20.59■□□□□ 0.89
SS18L2-201ENST00000011691 RBM46Q8TBY0 533 aaKnown RBP20.59■□□□□ 0.89
SS18L2-201ENST00000011691 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
SS18L2-201ENST00000011691 SRGNP10124 158 aa20.58■□□□□ 0.89
SS18L2-201ENST00000011691 HLFQ16534 295 aa20.58■□□□□ 0.89
SS18L2-201ENST00000011691 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
SS18L2-201ENST00000011691 PNISRQ8TF01 805 aaKnown RBP20.58■□□□□ 0.89
SS18L2-201ENST00000011691 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
SS18L2-201ENST00000011691 DDX10Q13206 875 aaKnown RBP20.57■□□□□ 0.88
SS18L2-201ENST00000011691 STYK1Q6J9G0 422 aa20.57■□□□□ 0.88
SS18L2-201ENST00000011691 CNKSR1Q969H4 720 aa20.57■□□□□ 0.88
SS18L2-201ENST00000011691 PNNQ9H307 717 aaKnown RBP20.57■□□□□ 0.88
SS18L2-201ENST00000011691 RRP7AQ9Y3A4 280 aaKnown RBP20.57■□□□□ 0.88
SS18L2-201ENST00000011691 GLTPD2A6NH11 291 aa20.56■□□□□ 0.88
SS18L2-201ENST00000011691 MYL6BP14649 208 aa20.56■□□□□ 0.88
SS18L2-201ENST00000011691 MASTLQ96GX5 879 aa20.56■□□□□ 0.88
SS18L2-201ENST00000011691 HTRA3P83110 453 aa20.55■□□□□ 0.88
SS18L2-201ENST00000011691 RALBP1Q15311 655 aa20.54■□□□□ 0.88
SS18L2-201ENST00000011691 ERFEQ4G0M1 354 aa20.54■□□□□ 0.88
SS18L2-201ENST00000011691 TPTE2Q6XPS3 522 aa20.54■□□□□ 0.88
SS18L2-201ENST00000011691 TAOK3Q9H2K8 898 aa20.54■□□□□ 0.88
SS18L2-201ENST00000011691 GTF2E1P29083 439 aaPredicted RBP20.53■□□□□ 0.88
SS18L2-201ENST00000011691 RIPK4P57078 832 aa20.53■□□□□ 0.88
SS18L2-201ENST00000011691 FSTL1Q12841 308 aa20.53■□□□□ 0.88
SS18L2-201ENST00000011691 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
SS18L2-201ENST00000011691 ZBTB3Q9H5J0 574 aa20.52■□□□□ 0.88
SS18L2-201ENST00000011691 TSPYL4Q9UJ04 414 aa20.52■□□□□ 0.88
SS18L2-201ENST00000011691 VEGFAP15692 232 aaPredicted RBP20.51■□□□□ 0.87
SS18L2-201ENST00000011691 NPR1P16066 1061 aa20.51■□□□□ 0.87
SS18L2-201ENST00000011691 KIF6Q6ZMV9 814 aa20.51■□□□□ 0.87
SS18L2-201ENST00000011691 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
SS18L2-201ENST00000011691 MAP3K15Q6ZN16 1313 aa20.51■□□□□ 0.87
SS18L2-201ENST00000011691 ABCC12Q96J65 1359 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 RGL2O15211 777 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 GPTP24298 496 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 DPY19L2Q6NUT2 758 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 OLFM4Q6UX06 510 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 SMC1BQ8NDV3 1235 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 LTBP3Q9NS15 1303 aa20.5■□□□□ 0.87
SS18L2-201ENST00000011691 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
SS18L2-201ENST00000011691 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
SS18L2-201ENST00000011691 DNAJC5GQ8N7S2 189 aa20.49■□□□□ 0.87
SS18L2-201ENST00000011691 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
SS18L2-201ENST00000011691 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
SS18L2-201ENST00000011691 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
SS18L2-201ENST00000011691 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
SS18L2-201ENST00000011691 ANKRD36CQ5JPF3 1778 aa20.48■□□□□ 0.87
SS18L2-201ENST00000011691 KLRG2A4D1S0 409 aaPredicted RBP20.47■□□□□ 0.87
SS18L2-201ENST00000011691 POTECB2RU33 542 aa20.47■□□□□ 0.87
SS18L2-201ENST00000011691 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
SS18L2-201ENST00000011691 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
SS18L2-201ENST00000011691 UBN2Q6ZU65 1347 aa20.47■□□□□ 0.87
SS18L2-201ENST00000011691 ANXA1P04083 346 aa20.46■□□□□ 0.87
SS18L2-201ENST00000011691 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
SS18L2-201ENST00000011691 NECTIN2Q92692 538 aa20.46■□□□□ 0.87
SS18L2-201ENST00000011691 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
SS18L2-201ENST00000011691 DDNO94850 711 aaPredicted RBP20.45■□□□□ 0.86
SS18L2-201ENST00000011691 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
SS18L2-201ENST00000011691 LMOD3Q0VAK6 560 aa20.44■□□□□ 0.86
SS18L2-201ENST00000011691 PROSER3Q2NL68 480 aa20.44■□□□□ 0.86
SS18L2-201ENST00000011691 SUSD4Q5VX71 490 aa20.44■□□□□ 0.86
SS18L2-201ENST00000011691 LAMB2P55268 1798 aa20.44■□□□□ 0.86
SS18L2-201ENST00000011691 ALDH1B1P30837 517 aa20.43■□□□□ 0.86
SS18L2-201ENST00000011691 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
SS18L2-201ENST00000011691 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
SS18L2-201ENST00000011691 LAS1LQ9Y4W2 734 aaKnown RBP20.43■□□□□ 0.86
SS18L2-201ENST00000011691 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
SS18L2-201ENST00000011691 SCN4AP35499 1836 aa20.43■□□□□ 0.86
SS18L2-201ENST00000011691 PDIA6Q15084 440 aa20.42■□□□□ 0.86
SS18L2-201ENST00000011691 GIGYF2Q6Y7W6 1299 aaKnown RBP20.42■□□□□ 0.86
SS18L2-201ENST00000011691 RPGRQ92834 1020 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms