RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 ANXA1P04083 346 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 PRPF40BQ6NWY9 871 aaKnown RBP12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 IL17RAQ96F46 866 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 TECPR2O15040 1411 aa12.58□□□□□ -0.4
CX3CL1-201ENST00000006053 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
CX3CL1-201ENST00000006053 PDRG1Q9NUG6 133 aa12.58□□□□□ -0.4
CX3CL1-201ENST00000006053 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 NECAB1Q8N987 351 aa12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 BRD2P25440 801 aaKnown RBP12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 PTH1RQ03431 593 aa12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 KDRP35968 1356 aa12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 KCNJ4P48050 445 aa12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 POLA2Q14181 598 aa12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
CX3CL1-201ENST00000006053 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
CX3CL1-201ENST00000006053 HMGN5P82970 282 aaKnown RBP12.56□□□□□ -0.4
CX3CL1-201ENST00000006053 FERMT3Q86UX7 667 aa12.56□□□□□ -0.4
CX3CL1-201ENST00000006053 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
CX3CL1-201ENST00000006053 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
CX3CL1-201ENST00000006053 MTMR6Q9Y217 621 aa12.56□□□□□ -0.4
CX3CL1-201ENST00000006053 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
CX3CL1-201ENST00000006053 AP5Z1O43299 807 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 CDK11BP21127 795 aaKnown RBP12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 CHPF2Q9P2E5 772 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 RGPD1P0DJD0 1748 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 MAP3K5Q99683 1374 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 GLRX3O76003 335 aaKnown RBP12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 CAMK4Q16566 473 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 FAM173BQ6P4H8 233 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 RUFY2Q8WXA3 655 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 TMEM51Q9NW97 253 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 LTKP29376 864 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 DMTNQ08495 405 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 CLASRPQ8N2M8 674 aaKnown RBP12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 DNAAF4Q8WXU2 420 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
CX3CL1-201ENST00000006053 CCDC94Q9BW85 323 aaPredicted RBP12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 KIF3AQ9Y496 699 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 TUBGCP6Q96RT7 1819 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 HOXC9P31274 260 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 FUCA2Q9BTY2 467 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 ME3Q16798 604 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 HSP90AB4PQ58FF6 505 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 TCEANC2Q96MN5 208 aa12.54□□□□□ -0.4
CX3CL1-201ENST00000006053 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 TNRQ92752 1358 aa12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 KCNQ3O43525 872 aa12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 VPS53Q5VIR6 699 aa12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 KCNF1Q9H3M0 494 aa12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 XRN1Q8IZH2 1706 aaKnown RBP12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.53□□□□□ -0.4
CX3CL1-201ENST00000006053 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.4
CX3CL1-201ENST00000006053 CBX1P83916 185 aa12.52□□□□□ -0.4
CX3CL1-201ENST00000006053 ZSCAN31Q96LW9 406 aaPredicted RBP12.52□□□□□ -0.4
CX3CL1-201ENST00000006053 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 CKAP2LQ8IYA6 745 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 ECHDC1Q9NTX5 307 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 SPTLC3Q9NUV7 552 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 C9orf78Q9NZ63 289 aaPredicted RBP12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 AGLP35573 1532 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 ST3GAL1Q11201 340 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 TTC6Q86TZ1 520 aa12.52□□□□□ -0.41
CX3CL1-201ENST00000006053 TTC41PQ6P2S7 1318 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 GOLGA6L4A6NEF3 574 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 KRT85P78386 507 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 AACSQ86V21 672 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 DRC7Q8IY82 874 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 KIAA1524Q8TCG1 905 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 RBM8AQ9Y5S9 174 aaKnown RBP12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 LIG1P18858 919 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 CDC37L1Q7L3B6 337 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 LUZP1Q86V48 1076 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 GPATCH3Q96I76 525 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 FAM227BQ96M60 508 aa12.51□□□□□ -0.41
CX3CL1-201ENST00000006053 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms