RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Polr3gQ6NXY9 223 aa12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ankib1Q6ZPS6 1085 aa12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 Col15a1O35206 1367 aa12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 Gm9992B2RWK3 458 aa12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 Unc93aQ710D3 458 aa12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 4930572O03RikQ8C5Y0 211 aa12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 Smarce1O54941 411 aaKnown RBP12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 Col16a1Q8BLX7 1580 aa12.14□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ifit2Q64112 472 aa12.13□□□□□ -0.47
Usp4-209ENSMUST00000194959 Kdm6aO70546 1401 aa12.13□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ppfia1B2RXQ2 1266 aa12.13□□□□□ -0.47
Usp4-209ENSMUST00000194959 Vwa3bJ9JI28 736 aa12.13□□□□□ -0.47
Usp4-209ENSMUST00000194959 Taf5lQ91WQ5 589 aa12.13□□□□□ -0.47
Usp4-209ENSMUST00000194959 Pdia6Q922R8 440 aaKnown RBP12.13□□□□□ -0.47
Usp4-209ENSMUST00000194959 Pes1Q9EQ61 584 aaKnown RBP12.13□□□□□ -0.47
Usp4-209ENSMUST00000194959 Rbm8a2A0A0N4SUH6 174 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Kcna6Q61923 529 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Rbm8aQ9CWZ3 174 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 C3P01027 1663 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Bach1P97302 739 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Fam228bQ497Q6 232 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Samm50Q8BGH2 469 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Q8BT18 775 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Gripap1Q8VD04 806 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 TnrQ8BYI9 1358 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Eif3bQ8JZQ9 803 aaKnown RBP12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 Pus3Q9JI38 481 aa12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 N4bp2F8VQG7 1678 aaKnown RBP12.12□□□□□ -0.47
Usp4-209ENSMUST00000194959 4931400O07RikQ9D4M5 137 aa12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 Mcm3P25206 812 aaKnown RBP12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 HdgfP51859 237 aaKnown RBP12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 VgfQ0VGU4 617 aa12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 Lmbrd2Q8C561 694 aa12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 Rapgef3Q8VCC8 918 aa12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 Smg7Q5RJH6 1138 aaKnown RBP12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 Sf3a1Q8K4Z5 791 aaKnown RBP12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 Rufy3Q9D394 469 aa12.11□□□□□ -0.47
Usp4-209ENSMUST00000194959 Gm45015A0A140LII9 184 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Gm18336A0A140LIU8 765 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Elmsan1E9Q2I4 1089 aaKnown RBP12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Card10P58660 1021 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Tti2Q8BGV4 512 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Golim4Q8BXA1 655 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Atg3Q9CPX6 314 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 ScaperF8VQ70 1398 aaKnown RBP12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Utp18Q5SSI6 552 aaKnown RBP12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Eif3aP23116 1344 aaKnown RBP12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Rad50P70388 1312 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Med1Q925J9 1575 aa12.1□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ugt1a5B2RT14 529 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Pkp1P97350 728 aaKnown RBP12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Dis3l2Q8CI75 870 aaKnown RBP12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Flad1Q8R123 492 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 ApobrQ8VBT6 942 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ak2Q9WTP6 239 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Rbbp8nlA2ABX0 614 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Kif4P33174 1231 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Cnnm3Q32NY4 713 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Iqsec3Q3TES0 1195 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ccnl1Q52KE7 532 aaKnown RBP12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ccdc66Q6NS45 935 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 GptQ8QZR5 496 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Clstn1Q9EPL2 979 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Anxa1P10107 346 aaKnown RBP12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Rad17Q6NXW6 688 aa12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Mrpl50Q8VDT9 159 aaKnown RBP12.09□□□□□ -0.47
Usp4-209ENSMUST00000194959 Ahnak2E9PYB0 1738 aaKnown RBP12.08□□□□□ -0.47
Usp4-209ENSMUST00000194959 Syt1P46096 421 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Nol10Q5RJG1 687 aaKnown RBP12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Stard3nlQ9DCI3 235 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Ubap1lG3UW59 384 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Stx6Q9JKK1 255 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Myd88P22366 296 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 DbnlQ62418 436 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Ptcd1Q8C2E4 695 aaKnown RBP12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 PtmsQ9D0J8 101 aaKnown RBP12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Phf14Q9D4H9 881 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Syde2E9PUP1 1314 aa12.08□□□□□ -0.48
Usp4-209ENSMUST00000194959 Amigo3Q8C2S7 508 aa12.07□□□□□ -0.48
Usp4-209ENSMUST00000194959 Utp3Q9JI13 469 aaKnown RBP12.07□□□□□ -0.48
Usp4-209ENSMUST00000194959 Ms4a2P20490 235 aa12.07□□□□□ -0.48
Usp4-209ENSMUST00000194959 Strn4P58404 760 aa12.07□□□□□ -0.48
Usp4-209ENSMUST00000194959 Anapc15P60007 132 aa12.07□□□□□ -0.48
Usp4-209ENSMUST00000194959 Hand2Q61039 217 aa12.07□□□□□ -0.48
Usp4-209ENSMUST00000194959 Sipa1l2Q80TE4 1722 aa12.07□□□□□ -0.48
Usp4-209ENSMUST00000194959 Cct2P80314 535 aaKnown RBP12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 VeztQ3ZK22 780 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 Tmem119Q8R138 280 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 Bcl11bQ99PV8 884 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 Abcc4E9Q236 1325 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 ImpactO55091 318 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 Kif20aP97329 887 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 NpeppsQ11011 920 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 Olfml1Q8BSH2 233 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 Tbc1d7Q9D0K0 293 aa12.06□□□□□ -0.48
Usp4-209ENSMUST00000194959 Irgm2A0A140LIF8 407 aa12.05□□□□□ -0.48
Usp4-209ENSMUST00000194959 Gnat3Q3V3I2 354 aa12.05□□□□□ -0.48
Usp4-209ENSMUST00000194959 Ppm1mQ8BU27 406 aa12.05□□□□□ -0.48
Usp4-209ENSMUST00000194959 Noc3lQ8VI84 807 aaKnown RBP12.05□□□□□ -0.48
Usp4-209ENSMUST00000194959 Cap2Q9CYT6 476 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 696 ms