RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Bloc1s2Q9CWG9 143 aa11.54□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Top2aQ01320 1528 aaKnown RBP11.54□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Sdc2P43407 202 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Drc1Q3USS3 753 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Cc2d1bQ8BRN9 848 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Ctage5Q8R311 779 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Rsph10bE9PYQ0 876 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Ccdc121E9Q6D3 323 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 LyarQ08288 388 aaKnown RBP11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Ankib1Q6ZPS6 1085 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Cep55Q8BT07 462 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Slc26a8Q8R0C3 999 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Fam114a2Q8VE88 497 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 SarnpQ9D1J3 210 aaKnown RBP11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Map3k13Q1HKZ5 959 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Tsg101Q61187 391 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Syap1Q9D5V6 365 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Q9D9H8 365 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 U2af2P26369 475 aaKnown RBP11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Srek1ip1Q4V9W2 153 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Arap1Q4LDD4 1452 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 ZfxP17012 799 aa11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Tubb5P99024 444 aaKnown RBP11.53□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Atxn3Q9CVD2 355 aa11.52□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Mkrn1Q9QXP6 481 aa11.52□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Eef1dP57776 281 aaKnown RBP11.52□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Srgap1Q91Z69 1062 aa11.52□□□□□ -0.56
Smchd1-201ENSMUST00000127430 Zc3h18Q0P678 948 aaKnown RBP11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Znf653Q6YND2 615 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Hdac9Q99N13 588 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Il4rP16382 810 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ncoa1P70365 1447 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Tmx3Q8BXZ1 456 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Bcar3Q9QZK2 820 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Psmd6Q99JI4 389 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 IbtkQ6ZPR6 1352 aaKnown RBP11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 ChkbO55229 394 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Pip4k2bQ80XI4 416 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Sil1Q9EPK6 465 aa11.52□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ccdc42Q5SV66 316 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Pde6cQ91ZQ1 861 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Psmc4P54775 418 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ehbp1Q69ZW3 1231 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Sec23ipQ6NZC7 998 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Sycp2Q9CUU3 1500 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mrpl44Q9CY73 333 aaKnown RBP11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 ScribQ80U72 1612 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Brd1E9PZ26 1189 aaKnown RBP11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Rad23bP54728 416 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Eif3j1Q3UGC7 261 aaKnown RBP11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Eif3j2Q66JS6 263 aa11.51□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Syt1P46096 421 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Q3UPC7 1272 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mrps27Q8BK72 415 aaKnown RBP11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ppm1fQ8CGA0 452 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Polr3dQ91WD1 398 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ddx27Q921N6 760 aaKnown RBP11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Klhl10Q9D5V2 608 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mtmr7Q9Z2C9 660 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mybbp1aQ7TPV4 1344 aaKnown RBP11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ampd3O08739 766 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ano2Q8CFW1 1002 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Calml4Q91WQ9 153 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ccdc114Q3UX62 658 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Rsrc1Q9DBU6 334 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Polr1aO35134 1717 aaKnown RBP11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zfp651E9PZ11 729 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Tyro3P55144 880 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zscan29E9Q5B4 869 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mindy4Q3UQI9 744 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Atf7Q8R0S1 413 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Bloc1s4Q8VED2 215 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Lman1Q9D0F3 517 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Shroom4Q1W617 1475 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Gm3409A0A0G2JE67 319 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Nap1l5Q9JJF0 156 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Golga5Q9QYE6 729 aa11.5□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Tshz3Q8CGV9 1081 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zkscan5Q9Z1D8 819 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zkscan4Q5SZT6 480 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Gramd4Q8CB44 633 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Nkx1-2P42580 305 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Top1Q04750 767 aaKnown RBP11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Sfi1Q3UZY0 1216 aaKnown RBP11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Irak4Q8R4K2 459 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ccdc162pQ0VG85 912 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Jph4Q80WT0 628 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Arfgap2Q99K28 520 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Rufy3Q9D394 469 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Asxl1P59598 1514 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Soga1E1U8D0 1418 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Eftud2O08810 971 aaKnown RBP11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 TmpoQ61033 693 aaKnown RBP11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Cnga2Q62398 664 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mrfap1Q9CQL7 125 aa11.49□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ube3aO08759 870 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 G3bp2P97379 482 aaKnown RBP11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Sdad1Q80UZ2 687 aaKnown RBP11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Hook3Q8BUK6 718 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Klhl30Q8C3F7 581 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 99.7 ms