RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Tpm4Q6IRU2 248 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Slf2Q6P9P0 1278 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Iffo2Q8R2V2 512 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Iqca1Q9CUL5 857 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Kidins220E9Q9B7 1793 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Abca6Q8K441 1624 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Abca9Q8K449 1623 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Trim27Q62158 513 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Mrps27Q8BK72 415 aaKnown RBP10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Nlrp3Q8R4B8 1033 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ginm1Q91WR6 327 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 NaspQ99MD9 773 aaKnown RBP10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Gm16486A0A1D5RMD1 1434 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Pde4dQ01063 747 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ccdc102aQ3TMW1 549 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Rassf4Q8CB96 322 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Mx2Q9WVP9 655 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Snap23O09044 210 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Prim1P20664 417 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Kank4Q6P9J5 1016 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 4930407I10RikD3Z5T8 1512 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ankrd44B2RXR6 993 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Zfp597E9Q6S0 419 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 FanclQ9CR14 375 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Amotl1Q9D4H4 968 aa10.38□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Myo3aQ8K3H5 1613 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Pik3r4Q8VD65 1358 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Zfp51Q3U4L8 781 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Drc7Q6V3W6 876 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Rbm33Q9CXK9 1231 aaKnown RBP10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Wdr33Q8K4P0 1330 aaKnown RBP10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Wdhd1P59328 1117 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Irx2P81066 474 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 ArsiQ32KI9 573 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ano6Q6P9J9 911 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 LlphQ9D945 130 aaKnown RBP10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 SetQ9EQU5 289 aaKnown RBP10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Cdc42bpgQ80UW5 1551 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Cdc42bpbQ7TT50 1713 aa10.37□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ell2Q3UKU1 639 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Mctp2Q5RJH2 878 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ahdc1Q6PAL7 1594 aaKnown RBP10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ddx41Q91VN6 622 aaKnown RBP10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ppp6r3Q922D4 844 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Kif14L0N7N1 1674 aaKnown RBP10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ccdc85cE9Q6B2 420 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Erich4Q3UNU4 136 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Miga2Q8BK03 593 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Pof1bQ8K4L4 587 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Dnaaf4Q8R368 420 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Hecw1Q8K4P8 1604 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 IghaA0A0A6YXW6 389 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ccdc162pQ0VG85 912 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ccdc34Q3UI66 367 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ddx19aQ61655 478 aaKnown RBP10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Taok3Q8BYC6 898 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Fbxo3Q9DC63 480 aa10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Scaf11E9PZM7 1456 aaKnown RBP10.36□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Zkscan16A2ALW2 728 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Bach1P97302 739 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 VeztQ3ZK22 780 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Fkbp5Q64378 456 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Bsdc1Q80Y55 427 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Naa30Q8CES0 364 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Efcab2Q9CQ46 164 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Tulp4Q9JIL5 1547 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Map9Q3TRR0 646 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 EappQ5BU09 281 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Tshz1Q5DTH5 1084 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ncoa4Q5U4H9 625 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Tmx1Q8VBT0 278 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Stx6Q9JKK1 255 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 AatfQ9JKX4 526 aaKnown RBP10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 CltcQ68FD5 1675 aaKnown RBP10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Hook1Q8BIL5 728 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ubxn4Q8VCH8 506 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Cdhr2E9Q7P9 1308 aa10.35□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Jdp2P97875 163 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Tshz3Q8CGV9 1081 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Aldh8a1Q8BH00 487 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Frat1P70339 274 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Prdm4Q80V63 803 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Def6Q8C2K1 630 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Znf335A2A5K6 1337 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Kiaa1107Q80TK0 1369 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Zscan29E9Q5B4 869 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Zdhhc9P59268 364 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 RgmbQ7TQ33 436 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Slu7Q8BHJ9 585 aa10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Ybx3Q9JKB3 361 aaKnown RBP10.34□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Dot1lQ6XZL8 1540 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Plekhg1F6S200 1446 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Mtx1P47802 317 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Mcm6P97311 821 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Gtpbp6Q3U6U5 514 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Pde3bQ61409 1100 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ccdc96Q9CR92 584 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Uri1Q3TLD5 531 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Ifit1bl2Q3U687 466 aa10.33□□□□□ -0.76
Col28a1-201ENSMUST00000115537 Sik1Q60670 779 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms