RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Arap2Q8BZ05 1703 aa23.91■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Tgfb1i1Q62219 461 aa23.91■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Brd1E9PZ26 1189 aaKnown RBP23.9■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Fkbp1aP26883 108 aaKnown RBP23.9■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Nlrp9bQ66X22 1003 aa23.9■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Esco1Q69Z69 843 aa23.9■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Cgnl1Q6AW69 1298 aa23.9■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Slfnl1Q8BHW9 410 aa23.9■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Vars2Q3U2A8 1060 aa23.89■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Lrrc43Q3V0L5 667 aa23.89■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 1700123L14RikQ3V2K7 440 aa23.89■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Q8BT18 775 aa23.89■■□□□ 1.42
Ttc39a-203ENSMUST00000106619 Lama4P97927 1816 aa23.89■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Gnat3Q3V3I2 354 aa23.88■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Adam1aQ60813 791 aa23.88■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 FanclQ9CR14 375 aa23.88■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Fam213aQ9CYH2 218 aa23.88■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 InsrrQ9WTL4 1300 aa23.87■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Hmgb2P30681 210 aaKnown RBP23.87■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 VgfQ0VGU4 617 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Ankrd13dQ6PD24 605 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Gcc1Q9D4H2 778 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Ppp2r3aB2RXC8 1150 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Mcmdc2E9Q956 681 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Slc4a10Q5DTL9 1118 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Slf2Q6P9P0 1278 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Dpf1Q9QX66 387 aa23.86■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Strn4P58404 760 aa23.85■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Casz1Q9CWL2 1761 aa23.84■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Ccdc27Q3V036 639 aa23.84■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Trip6Q9Z1Y4 480 aa23.84■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Atg4a-psA0A0G2JFS9 396 aa23.83■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 GpkowQ56A08 488 aa23.83■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Atg4aQ8C9S8 396 aa23.83■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Snapc4Q8BP86 1333 aa23.83■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Kiaa0232Q80U59 1396 aaKnown RBP23.83■■□□□ 1.41
Ttc39a-203ENSMUST00000106619 Map7O88735 730 aa23.83■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Mcm2P97310 904 aa23.82■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 SowahdQ8BY98 327 aa23.82■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Smarca5Q91ZW3 1051 aaKnown RBP23.82■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Nsfl1cQ9CZ44 370 aaKnown RBP23.82■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Phlpp2Q8BXA7 1320 aa23.81■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Kif18aQ91WD7 886 aa23.81■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Pnmal2G3X9N3 661 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Cyp19a1P28649 503 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Snai1Q02085 264 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Pim2Q62070 370 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Liat1Q810M6 228 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Clca2Q8BG22 942 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Smc4Q8CG47 1286 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 NexnQ7TPW1 607 aa23.8■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Atp1b3P97370 278 aa23.79■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 HmcesQ8R1M0 353 aaKnown RBP23.79■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Trim34aQ99PP6 485 aa23.79■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Abcc4E9Q236 1325 aa23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Adora1Q60612 326 aa23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Ankrd31A0A140LI88 1765 aa23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Zfyve9A2A8R0 1397 aa23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Pa2g4P50580 394 aaKnown RBP23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Ifit1bl2Q3U687 466 aa23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Tmem87bQ8BKU8 555 aa23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Ttc19Q8CC21 365 aa23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 RtcbQ99LF4 505 aaKnown RBP23.78■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Col22a1E9Q7P1 1613 aa23.77■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Plcb3P51432 1234 aaKnown RBP23.77■■□□□ 1.4
Ttc39a-203ENSMUST00000106619 Ccdc146E9Q9F7 977 aa23.76■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Hoxa7P02830 229 aa23.76■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 NgdnQ9DB96 315 aaKnown RBP23.76■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 MpndQ3TV65 487 aa23.75■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 KnstrnQ9D9Z1 312 aaKnown RBP23.75■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Greb1lB9EJV3 1913 aa23.75■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 GptQ8QZR5 496 aa23.75■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Foxo4Q9WVH3 505 aa23.75■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Cyp46a1Q9WVK8 500 aa23.75■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Wdr63B2RY71 923 aa23.74■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Prl3d2F6R3P9 224 aa23.74■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Cops6O88545 324 aa23.74■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Rtkn2Q14B46 604 aa23.74■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Zbtb3Q91X45 518 aa23.74■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Cct4P80315 539 aaKnown RBP23.73■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 CanxP35564 591 aaKnown RBP23.73■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Igflr1Q3U4N7 345 aa23.73■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Susd4Q8BH32 490 aa23.73■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 AtrnQ9WU60 1428 aa23.72■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Dctn1O08788 1281 aa23.71■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Npy5rO70342 466 aa23.71■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Cog6Q8R3I3 657 aa23.71■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Mapk8ip1Q9WVI9 707 aa23.71■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Adamtsl1Q8BLI0 1745 aa23.71■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Cyp2c23E9Q5K4 494 aa23.7■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 4930567H17RikQ3V0K5 233 aa23.7■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Zc3h12cQ5DTV4 884 aa23.7■■□□□ 1.39
Ttc39a-203ENSMUST00000106619 Plch1Q4KWH5 1682 aa23.7■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Ubr3Q5U430 1889 aa23.7■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Myh1Q5SX40 1942 aa23.7■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Prl3d3A0A0M6L0J6 224 aa23.7■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Zbtb38Q3LR78 1197 aa23.7■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Nol10Q5RJG1 687 aaKnown RBP23.7■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Srp68Q8BMA6 625 aaKnown RBP23.7■■□□□ 1.38
Ttc39a-203ENSMUST00000106619 Hsp90ab1P11499 724 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 127.1 ms