RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Mfap1aC0HKD8 439 aaKnown RBP10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Mfap1bC0HKD9 439 aaKnown RBP10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 AppP12023 770 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Gnl3lQ6PGG6 577 aaKnown RBP10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Ripor2Q80U16 1078 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 GptQ8QZR5 496 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Cyp46a1Q9WVK8 500 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Adora1Q60612 326 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Cgnl1Q6AW69 1298 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Edc3Q8K2D3 508 aaKnown RBP10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Chmp3Q9CQ10 224 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Zcrb1Q9CZ96 217 aaKnown RBP10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Bcar3Q9QZK2 820 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Rps6ka4Q9Z2B9 773 aa10.76□□□□□ -0.69
Trim39-201ENSMUST00000042717 Nav1Q8CH77 1875 aa10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 PappaQ8R4K8 1624 aa10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 Ets1P27577 440 aa10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 CalcaP70160 136 aa10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 Slf2Q6P9P0 1278 aa10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 Wdr63B2RY71 923 aa10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 Mum1Q6DID5 682 aa10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 Nsfl1cQ9CZ44 370 aaKnown RBP10.75□□□□□ -0.69
Trim39-201ENSMUST00000042717 Mcmdc2E9Q956 681 aa10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Hsp90ab1P11499 724 aaKnown RBP10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Eif2s2Q99L45 331 aaKnown RBP10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Gcc1Q9D4H2 778 aa10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Phlpp2Q8BXA7 1320 aa10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Prr5lA2AVJ5 370 aa10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Q8C5K5 320 aa10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 LratQ9JI60 231 aa10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Nek4Q9Z1J2 792 aa10.74□□□□□ -0.69
Trim39-201ENSMUST00000042717 Hmox1P14901 289 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 MpndQ3TV65 487 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Gnat3Q3V3I2 354 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Aldh8a1Q8BH00 487 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 4930523C07RikE9Q2T4 99 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Fbln2P37889 1221 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Esco1Q69Z69 843 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Fnbp4Q6ZQ03 1031 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Ipo8Q7TMY7 1010 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Dhx38Q80X98 1228 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Egfem1Q8C088 590 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Gm13023A2A8N2 498 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 AK157302I3ITR1 129 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Neurod6P48986 337 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Cers3Q1A3B0 383 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Zbtb45Q52KG4 520 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Kiaa0319Q5SZV5 1081 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Isca1Q9D924 129 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Trip6Q9Z1Y4 480 aa10.73□□□□□ -0.69
Trim39-201ENSMUST00000042717 Zbtb3Q91X45 518 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 Fam213aQ9CYH2 218 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 Arhgap33Q80YF9 1305 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 Shank3Q4ACU6 1730 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 MetP16056 1379 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 Dctn1O08788 1281 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 GalcP54818 684 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 GorabQ8BRM2 368 aa10.72□□□□□ -0.69
Trim39-201ENSMUST00000042717 Ifit1bl2Q3U687 466 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 Nol10Q5RJG1 687 aaKnown RBP10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 NexnQ7TPW1 607 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 Kiaa0319lQ8K135 1048 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 NgdnQ9DB96 315 aaKnown RBP10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 Sos2Q02384 1333 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 InsrrQ9WTL4 1300 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 ScaperF8VQ70 1398 aaKnown RBP10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 ChgaP26339 463 aaKnown RBP10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 Nlrp9bQ66X22 1003 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 Ptpdc1Q6NZK8 747 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 Ankrd13dQ6PD24 605 aa10.71□□□□□ -0.69
Trim39-201ENSMUST00000042717 Ddx60E9PZQ1 1711 aa10.71□□□□□ -0.7
Trim39-201ENSMUST00000042717 Smc4Q8CG47 1286 aa10.71□□□□□ -0.7
Trim39-201ENSMUST00000042717 Afg3l2Q8JZQ2 802 aaKnown RBP10.71□□□□□ -0.7
Trim39-201ENSMUST00000042717 BccipQ9CWI3 316 aa10.71□□□□□ -0.7
Trim39-201ENSMUST00000042717 Q9D2X8 372 aa10.71□□□□□ -0.7
Trim39-201ENSMUST00000042717 VgfQ0VGU4 617 aa10.7□□□□□ -0.7
Trim39-201ENSMUST00000042717 Trim34aQ99PP6 485 aa10.7□□□□□ -0.7
Trim39-201ENSMUST00000042717 4930504O13RikQ8C5Z9 145 aa10.7□□□□□ -0.7
Trim39-201ENSMUST00000042717 Mapk8ip1Q9WVI9 707 aa10.7□□□□□ -0.7
Trim39-201ENSMUST00000042717 Cyp2c23E9Q5K4 494 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Mcm2P97310 904 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Rrs1Q9CYH6 365 aaKnown RBP10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Stk3Q9JI10 497 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Tbc1d9Q3UYK3 1264 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Cyp7a1Q64505 503 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Fbxo41Q6NS60 873 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Tpx2A2APB8 745 aaKnown RBP10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Cops6O88545 324 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Cyp19a1P28649 503 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Atp1b3P97370 278 aa10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Srp68Q8BMA6 625 aaKnown RBP10.69□□□□□ -0.7
Trim39-201ENSMUST00000042717 Hsp90b1P08113 802 aaKnown RBP10.68□□□□□ -0.7
Trim39-201ENSMUST00000042717 Clca2Q8BG22 942 aa10.68□□□□□ -0.7
Trim39-201ENSMUST00000042717 Slc26a8Q8R0C3 999 aa10.68□□□□□ -0.7
Trim39-201ENSMUST00000042717 Nkx1-2P42580 305 aa10.68□□□□□ -0.7
Trim39-201ENSMUST00000042717 VeztQ3ZK22 780 aa10.68□□□□□ -0.7
Trim39-201ENSMUST00000042717 Tktl2Q9D4D4 627 aa10.68□□□□□ -0.7
Trim39-201ENSMUST00000042717 Brpf1B2RRD7 1212 aa10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 Anxa1P10107 346 aaKnown RBP10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 Cct4P80315 539 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms