RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Chmp4cQ9D7F7 232 aa23.78■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Shank2Q80Z38 1476 aa23.78■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Iqsec3Q3TES0 1195 aa23.77■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 EspnlQ3UYR4 1005 aa23.77■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Ifit2Q64112 472 aa23.77■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 ThemisQ8BGW0 636 aa23.77■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Cchcr1Q8K2I2 770 aa23.77■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Kcnb2A6H8H5 907 aa23.77■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Ccar2Q8VDP4 922 aaKnown RBP23.77■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Cpa2Q504N0 417 aa23.76■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Fez1Q8K0X8 392 aa23.76■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Sf3a1Q8K4Z5 791 aaKnown RBP23.76■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 SnrkQ8VDU5 748 aa23.76■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Phkg2Q9DB30 406 aa23.76■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Ltbp4Q8K4G1 1666 aa23.76■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Ccdc155Q80VJ8 648 aa23.75■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Atf3Q60765 181 aa23.75■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 OptnQ8K3K8 584 aa23.75■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Mybbp1aQ7TPV4 1344 aaKnown RBP23.75■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Syt1P46096 421 aa23.74■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Wdr93Q402B2 695 aa23.74■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Tti2Q8BGV4 512 aa23.74■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Tbc1d30Q69ZT9 766 aa23.74■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Ddx11Q6AXC6 880 aa23.74■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Pdcl2Q78Y63 240 aa23.74■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Dhx16G3X8X0 1044 aaKnown RBP23.73■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Sgsm2Q80U12 1005 aa23.73■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Zfp804bA0A0G2JGH6 1343 aa23.73■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 CrklP47941 303 aa23.72■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Ubxn10Q8BG34 277 aa23.72■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Chmp7Q8R1T1 451 aa23.72■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Lmbr1lQ9D1E5 489 aa23.72■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Pof1bQ8K4L4 587 aa23.72■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Ddx60E9PZQ1 1711 aa23.71■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Nlrp9bQ66X22 1003 aa23.71■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Dmrt2Q8BG36 561 aa23.71■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Stx6Q9JKK1 255 aa23.71■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Tbc1d4Q8BYJ6 1307 aa23.71■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Tjp1P39447 1745 aaKnown RBP23.71■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Tnks1bp1P58871 1720 aa23.71■■□□□ 1.39
Ccdc34-201ENSMUST00000028580 Dixdc1Q80Y83 711 aa23.7■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Q9D9S1 216 aa23.7■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Card10P58660 1021 aa23.69■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 GnpatP98192 678 aa23.69■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Rhot2Q8JZN7 620 aa23.69■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Smc3Q9CW03 1217 aaKnown RBP23.69■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Ubr2Q6WKZ8 1755 aa23.69■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Igfbp6P47880 238 aa23.69■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 TefQ9JLC6 301 aa23.69■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Col22a1E9Q7P1 1613 aa23.68■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Rcan3Q9JKK0 239 aa23.68■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Bag3Q9JLV1 577 aaKnown RBP23.68■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Bms1Q6PGF5 1284 aaKnown RBP23.68■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Slc26a8Q8R0C3 999 aa23.68■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Erich6bQ9D4S6 220 aa23.68■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Rbm8a2A0A0N4SUH6 174 aa23.67■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 E4f1Q8CCE9 783 aa23.67■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Edc3Q8K2D3 508 aaKnown RBP23.67■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Rbm8aQ9CWZ3 174 aa23.67■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Ak2Q9WTP6 239 aa23.67■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Zscan25B2RX31 543 aa23.66■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Ssfa2Q922B9 1252 aa23.66■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Ric1Q69ZJ7 1422 aa23.65■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 InsrrQ9WTL4 1300 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Gm21698A0A087WQP8 267 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Gm21671G3UY31 267 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Ets1P27577 440 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Ube2hP62257 183 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Pip4k2bQ80XI4 416 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Cdca7lQ922M5 438 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 Slit1Q80TR4 1531 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 DccP70211 1447 aa23.64■■□□□ 1.38
Ccdc34-201ENSMUST00000028580 SrrtQ99MR6 875 aaKnown RBP23.64■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Fam184aE9PW83 1143 aa23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Clcn1Q64347 994 aa23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Tmem87bQ8BKU8 555 aa23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 MypnQ5DTJ9 1315 aa23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 FocadA2AKG8 1798 aa23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Med4Q9CQA5 270 aa23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Il1rapl2Q9ERS6 686 aa23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Psma5Q9Z2U1 241 aaKnown RBP23.63■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Ttll7A4Q9F0 912 aa23.62■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Cnnm1Q0GA42 951 aa23.62■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 RubcnlQ3TD16 648 aa23.62■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Rbm27Q5SFM8 1060 aaKnown RBP23.62■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Ripor2Q80U16 1078 aa23.62■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 DpydQ8CHR6 1025 aa23.62■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Atf7Q8R0S1 413 aa23.62■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Bcl9lQ67FY2 1494 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Eef2kO08796 724 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Zbtb45Q52KG4 520 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Prkab2Q6PAM0 271 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Asic4Q7TNS7 539 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Ccdc178Q8CDV0 866 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Ush1cQ9ES64 910 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Zranb3Q6NZP1 1069 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Sp8Q8BMJ8 486 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Abca15E9PWH4 1668 aa23.61■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Rnf20Q5DTM8 973 aa23.6■■□□□ 1.37
Ccdc34-201ENSMUST00000028580 Rnf214Q8BFU3 668 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms