RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Dnajc5gQ8C632 165 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ttc19Q8CC21 365 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Hmgn5Q9JL35 406 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Erbb4Q61527 1308 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tpx2A2APB8 745 aaKnown RBP10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ankib1Q6ZPS6 1085 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Col16a1Q8BLX7 1580 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rad50P70388 1312 aa10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Utp18Q5SSI6 552 aaKnown RBP10.08□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Arap3Q8R5G7 1538 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Cfap99A0A140LIX9 648 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tmem266Q8BZB3 538 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Pof1bQ8K4L4 587 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tshz3Q8CGV9 1081 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tpm3P21107 285 aaKnown RBP10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Nlrp3Q8R4B8 1033 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Bloc1s4Q8VED2 215 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rapgef4Q9EQZ6 1011 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 BcanQ61361 883 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Jmjd4Q8BFT6 427 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Pdcl3Q8BVF2 240 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 ImmtQ8CAQ8 757 aaKnown RBP10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Prr29B1ARI9 187 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Pdzrn3Q69ZS0 1063 aa10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rrs1Q9CYH6 365 aaKnown RBP10.07□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Irgm2A0A140LIF8 407 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ppp4r3bQ922R5 820 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 1700006A11RikB9EHI3 544 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 RdxP26043 583 aaKnown RBP10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Iqsec3Q3TES0 1195 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Bicd2Q921C5 820 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Stx6Q9JKK1 255 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Pa2g4P50580 394 aaKnown RBP10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ppp1r37Q8BKR5 712 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 AidaQ8C4Q6 305 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Il1rapl2Q9ERS6 686 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Dnai2A2AC93 623 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Slx4ipQ9D7Y9 413 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Asic4Q7TNS7 539 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Odf2lQ9D478 642 aa10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Utp3Q9JI13 469 aaKnown RBP10.06□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Nol12Q8BG17 217 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Nup88Q8CEC0 753 aaKnown RBP10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ubxn4Q8VCH8 506 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Pmfbp1Q9WVQ0 1022 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Krt85Q9Z2T6 507 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tnrc6bQ8BKI2 1810 aaKnown RBP10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ifit2Q64112 472 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Gpatch3Q8BIY1 525 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ddx54Q8K4L0 874 aaKnown RBP10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Fam213aQ9CYH2 218 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Nid2O88322 1403 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rbm8a2A0A0N4SUH6 174 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 CrebrfQ8CDG5 640 aaKnown RBP10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rbm8aQ9CWZ3 174 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Aox2Q5SGK3 1345 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Slit2Q9R1B9 1521 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rbbp8nlA2ABX0 614 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Arhgef1Q61210 920 aaKnown RBP10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Krt25Q8VCW2 446 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Trim34aQ99PP6 485 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Antxr1Q9CZ52 562 aa10.05□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Prkab2Q6PAM0 271 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Nek11Q8C0Q4 628 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rdm1Q9CQK3 281 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Gm45015A0A140LII9 184 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Gm18336A0A140LIU8 765 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tpm3-rs7D3Z2H9 248 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Polr3dQ91WD1 398 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ssfa2Q922B9 1252 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 4931400O07RikQ9D4M5 137 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Dhx16G3X8X0 1044 aaKnown RBP10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 CrcpO35427 148 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Prl7d1P04769 244 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Igbp1bQ9QZ29 343 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Prdm2A2A7B5 1709 aaKnown RBP10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Cyp2d12Q8BVD2 504 aa10.04□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rimbp3Q3V0F0 1606 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Abcc4E9Q236 1325 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Syce3B5KM66 88 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tti2Q8BGV4 512 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Rufy2Q8R4C2 606 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Kif2cQ922S8 721 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Cpa2Q504N0 417 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Larp1Q6ZQ58 1072 aaKnown RBP10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Nsfl1cQ9CZ44 370 aaKnown RBP10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Ak2Q9WTP6 239 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Tbc1d4Q8BYJ6 1307 aa10.03□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Cul9Q80TT8 1865 aa10.02□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Prl3d2F6R3P9 224 aa10.02□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 CalcaP70160 136 aa10.02□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Acsbg1Q99PU5 721 aa10.02□□□□□ -0.8
Sf3b1-201ENSMUST00000027127 Prl3d3A0A0M6L0J6 224 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ube2hP62257 183 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Cnnm3Q32NY4 713 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Tmx3Q8BXZ1 456 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Ptpn23Q6PB44 1692 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Syt1P46096 421 aa10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Rnf214Q8BFU3 668 aaKnown RBP10.02□□□□□ -0.81
Sf3b1-201ENSMUST00000027127 Bloc1s2Q9CWG9 143 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms