RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 GCNT2Q8N0V5 402 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 MCUQ8NE86 351 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 SLC44A1Q8WWI5 657 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 ANKRD7Q92527 254 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 PPWD1Q96BP3 646 aaKnown RBP11.46□□□□□ -0.57
DDX41-215ENST00000512431 FAM111AQ96PZ2 611 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 F2RL3Q96RI0 385 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 MAPKAP1Q9BPZ7 522 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 TUBA1CQ9BQE3 449 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 ANGPTL4Q9BY76 406 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 PRDM7Q9NQW5 492 aa11.46□□□□□ -0.57
DDX41-215ENST00000512431 ATRQ13535 2644 aa11.46□□□□□ -0.58
DDX41-215ENST00000512431 STAB1Q9NY15 2570 aa11.46□□□□□ -0.58
DDX41-215ENST00000512431 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
DDX41-215ENST00000512431 OR6C76A6NM76 312 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 HAX1O00165 279 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 CDC7O00311 574 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 MSTNO14793 375 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 TLX2O43763 284 aaPredicted RBP11.45□□□□□ -0.58
DDX41-215ENST00000512431 CDH16O75309 829 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 SMNDC1O75940 238 aaKnown RBP eCLIP11.45□□□□□ -0.58
DDX41-215ENST00000512431 AHSGP02765 367 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 CCDC175P0C221 793 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 NID1P14543 1247 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 CHMP24386 653 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 SLCO1A2P46721 670 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 HERVK_113P63132 956 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 ERVK-8P63133 956 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 CDKL1Q00532 357 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 SRYQ05066 204 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 PCDH1Q08174 1060 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 FAM27E3Q08E93 113 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 TNK1Q13470 666 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 ZNF267Q14586 743 aaPredicted RBP11.45□□□□□ -0.58
DDX41-215ENST00000512431 DCST1Q5T197 706 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 ANKRD22Q5VYY1 191 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 HLA-DQA1Q5Y7H0 255 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 SBSNQ6UWP8 590 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 FRA10AC1Q70Z53 315 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 HIPK1Q86Z02 1210 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 OR4N5Q8IXE1 308 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 RNF10Q8N5U6 811 aaKnown RBP11.45□□□□□ -0.58
DDX41-215ENST00000512431 ACOT4Q8N9L9 421 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 OR1J4Q8NGS1 313 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 PDLIM5Q96HC4 596 aaKnown RBP11.45□□□□□ -0.58
DDX41-215ENST00000512431 KRT12Q99456 494 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 PELOQ9BRX2 385 aaKnown RBP11.45□□□□□ -0.58
DDX41-215ENST00000512431 TBCDQ9BTW9 1192 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 ERVK-6Q9BXR3 956 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 WWTR1Q9GZV5 400 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 SNX15Q9NRS6 342 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 FETUBQ9UGM5 382 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 ERVK-19Q9WJR5 959 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 VWA7Q9Y334 891 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 NCKAP5O14513 1909 aa11.45□□□□□ -0.58
DDX41-215ENST00000512431 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 C2orf92A0A1B0GVN3 265 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 HRKO00198 91 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 GNB5O14775 395 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 CLGNO14967 610 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 SIAH2O43255 324 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 FGF17O60258 216 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 OR10H2O60403 315 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 TMCC2O75069 709 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 FGGP02679 453 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 PAX1P15863 534 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 ALOX15P16050 662 aaPredicted RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 KRT15P19012 456 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 ATP5A1P25705 553 aaKnown RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 TLX1P31314 330 aaPredicted RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 CD79BP40259 229 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 GDF5P43026 501 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 PCYT1AP49585 367 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 ATP5J2P56134 94 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 NRG3P56975 720 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 FBXW4P57775 412 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 IGLV3-21P80748 117 aaPredicted RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 SETDB1Q15047 1291 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 HIST2H2ACQ16777 129 aaPredicted RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 PPP1R3AQ16821 1122 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 AP5B1Q2VPB7 878 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 BICRALQ6AI39 1079 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 HIST2H2AA3Q6FI13 130 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 FAM45BPQ6NSW5 357 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 YRDCQ86U90 279 aaKnown RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 BBOF1Q8ND07 529 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 FAM83FQ8NEG4 500 aaPredicted RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 FAM45AQ8TCE6 357 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 SPPL2AQ8TCT8 520 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 TANKQ92844 425 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 TP53INP1Q96A56 240 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 TMEM41AQ96HV5 264 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 UCN2Q96RP3 112 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 SLC39A3Q9BRY0 314 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 TSPY26PQ9H489 355 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 RPF2Q9H7B2 306 aaKnown RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 TEX10Q9NXF1 929 aaPredicted RBP11.44□□□□□ -0.58
DDX41-215ENST00000512431 MS4A12Q9NXJ0 267 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 GPRC5BQ9NZH0 403 aa11.44□□□□□ -0.58
DDX41-215ENST00000512431 CORO1CQ9ULV4 474 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms