RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SENP5Q96HI0 755 aaPredicted RBP13.98□□□□□ -0.17
RNF4-210ENST00000508235 FBXL20Q96IG2 436 aa13.98□□□□□ -0.17
RNF4-210ENST00000508235 FCRL1Q96LA6 429 aa13.98□□□□□ -0.17
RNF4-210ENST00000508235 ZNF395Q9H8N7 513 aaPredicted RBP13.98□□□□□ -0.17
RNF4-210ENST00000508235 RYDENQ9NUL5 291 aaKnown RBP13.98□□□□□ -0.17
RNF4-210ENST00000508235 ENTPD4Q9Y227 616 aa13.98□□□□□ -0.17
RNF4-210ENST00000508235 B3GNT3Q9Y2A9 372 aa13.98□□□□□ -0.17
RNF4-210ENST00000508235 LAMA5O15230 3695 aa13.98□□□□□ -0.17
RNF4-210ENST00000508235 ATP6AP2A0A1C7CYW4 349 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 WASHC1A8K0Z3 465 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 PEX11AO75192 247 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 ATP6AP2O75787 350 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 DDAH2O95865 285 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 CASRP41180 1078 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 TLR1Q15399 786 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 HSP90B2PQ58FF3 399 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 C6orf136Q5SQH8 315 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 FAM71E1Q6IPT2 247 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 CRLF3Q8IUI8 442 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 GALNT12Q8IXK2 581 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 LRRC34Q8IZ02 419 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 ARMC10Q8N2F6 343 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 LRRC25Q8N386 305 aaPredicted RBP13.97□□□□□ -0.17
RNF4-210ENST00000508235 RBMXL3Q8N7X1 1067 aaKnown RBP13.97□□□□□ -0.17
RNF4-210ENST00000508235 OR5L2Q8NGL0 311 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.97□□□□□ -0.176e-6■■■■■ 33.5
RNF4-210ENST00000508235 LRRC8CQ8TDW0 803 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 ZNF721Q8TF20 911 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 CNPPD1Q9BV87 410 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 CDCP1Q9H5V8 836 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 INTS9Q9NV88 658 aaKnown RBP13.97□□□□□ -0.17
RNF4-210ENST00000508235 ZNF446Q9NWS9 450 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 TAS2R7Q9NYW3 318 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 HEY2Q9UBP5 337 aa13.97□□□□□ -0.17
RNF4-210ENST00000508235 TRPC5OSA6NMA1 111 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 ATP8B1O43520 1251 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 C1QL1O75973 258 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 PRPS2P11908 318 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 PCSK2P16519 638 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 SDC1P18827 310 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 NT5EP21589 574 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 MPIP34949 423 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 RPL3P39023 403 aaKnown RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 MLF1P58340 268 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 OCRLQ01968 901 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 ZNF267Q14586 743 aaPredicted RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 SLC6A19Q695T7 634 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 MMP21Q8N119 569 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 BEST3Q8N1M1 668 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 HORMAD2Q8N7B1 307 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 FNDC5Q8NAU1 212 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 OR7G1Q8NGA0 311 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 SUN3Q8TAQ9 357 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 ZNF75CPQ92670 426 aaPredicted RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 EXOSC8Q96B26 276 aaKnown RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 ZNF764Q96H86 408 aaPredicted RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 C3orf30Q96M34 536 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 UTP23Q9BRU9 249 aaKnown RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 CXorf21Q9HAI6 301 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 ZBTB20Q9HC78 741 aaPredicted RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 SLC35C2Q9NQQ7 365 aa13.96□□□□□ -0.17
RNF4-210ENST00000508235 NOP53Q9NZM5 478 aaKnown RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 EIF3LQ9Y262 564 aaKnown RBP13.96□□□□□ -0.17
RNF4-210ENST00000508235 COL6A6A6NMZ7 2263 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 TRAV17A0A0B4J275 112 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 OR5H15A6NDH6 313 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 OR6C76A6NM76 312 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 GABRR3A8MPY1 467 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 HDAC3O15379 428 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 SUV39H1O43463 412 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 WDPCPO95876 746 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 IGKV3-11P04433 115 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 BCKDHAP12694 445 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 FEN1P39748 380 aaKnown RBP13.95□□□□□ -0.18
RNF4-210ENST00000508235 ERVK-8P63133 956 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 RNF4P78317 190 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 EMX2Q04743 252 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 NADK2Q4G0N4 442 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 FCRLBQ6BAA4 426 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 RNF111Q6ZNA4 994 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 Q6ZS92 163 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 SLC29A4Q7RTT9 530 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 R3HCC1LQ7Z5L2 792 aaKnown RBP13.95□□□□□ -0.18
RNF4-210ENST00000508235 TICAM1Q8IUC6 712 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 FAM9CQ8IZT9 166 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 VWA5B2Q8N398 1253 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 NUBPLQ8TB37 319 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 ERP27Q96DN0 273 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 MTERF3Q96E29 417 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 CNRIP1Q96F85 164 aaPredicted RBP13.95□□□□□ -0.18
RNF4-210ENST00000508235 ZNF681Q96N22 645 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 TSSK3Q96PN8 268 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 BBS4Q96RK4 519 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 MFRPQ9BY79 579 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.95□□□□□ -0.18
RNF4-210ENST00000508235 MEAF6Q9HAF1 191 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 MED4Q9NPJ6 270 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 SLAMF7Q9NQ25 335 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 PNPOQ9NVS9 261 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 MYOTQ9UBF9 498 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms