RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	ALDH6A1	Q02252	535 aa	Known RBP	13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ACSM2A	Q08AH3	577 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ASPH	Q12797	758 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PCLAF	Q15004	111 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SPDYA	Q5MJ70	313 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ACSM2B	Q68CK6	577 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MDGA2	Q7Z553	956 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	C9orf40	Q8IXQ3	194 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CPSF7	Q8N684	471 aa	Known RBP	13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	OR8K3	Q8NH51	312 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	APIP	Q96GX9	242 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FBXL20	Q96IG2	436 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GAL3ST4	Q96RP7	486 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RASL10B	Q96S79	203 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SMC6	Q96SB8	1091 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SLC17A7	Q9P2U7	560 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SEC14L3	Q9UDX4	400 aa		13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FLNB	O75369	2602 aa	Known RBP	13.12	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HIVEP3	Q5T1R4	2406 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GNG14	A0A1W2PPG7	69 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	NPIPA5	E9PKD4	350 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PCDH7	O60245	1069 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TRIM13	O60858	407 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	IGKV3-11	P04433	115 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CPM	P14384	443 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CREB1	P16220	341 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	NT5E	P21589	574 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FEN1	P39748	380 aa	Known RBP	13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RFC3	P40938	356 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MEOX1	P50221	254 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GPR85	P60893	370 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RAE1	P78406	368 aa	Known RBP	13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	IMPG1	Q17R60	797 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SPRED3	Q2MJR0	410 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	KRT71	Q3SY84	523 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FAM180B	Q6P0A1	224 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SLC48A1	Q6P1K1	146 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RNF111	Q6ZNA4	994 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SLC29A4	Q7RTT9	530 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SULF2	Q8IWU5	870 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MREG	Q8N565	214 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TCP10L	Q8TDR4	215 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SSC4D	Q8WTU2	575 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	KLHL29	Q96CT2	875 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FRMD6	Q96NE9	622 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FAIM2	Q9BWQ8	316 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GATA5	Q9BWX5	397 aa	Predicted RBP	13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	EBPL	Q9BY08	206 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CXorf21	Q9HAI6	301 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TNFRSF12A	Q9NP84	129 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TIMMDC1	Q9NPL8	285 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MKS1	Q9NXB0	559 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MCM8	Q9UJA3	840 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CES1P1	Q9UKY3	287 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	NPIPA1	Q9UND3	350 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SLC5A6	Q9Y289	635 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	FIS1	Q9Y3D6	152 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	POLE	Q07864	2286 aa		13.11	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ASPDH	A6ND91	283 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GOLGA6L10	A6NI86	522 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459		H3BQF6	201 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	KLRC4-KLRK1	H3BQV0	150 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	LRRTM2	O43300	516 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PEX1	O43933	1283 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF354A	O60765	605 aa	Predicted RBP	13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	IL3	P08700	152 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CT62	P0C5K7	136 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RNF224	P0DH78	156 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	POR	P16435	677 aa	Predicted RBP	13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ALDH3A1	P30838	453 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SSTR4	P31391	388 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GALNS	P34059	522 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PTGER1	P34995	402 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TRA2B	P62995	288 aa	Known RBP	13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SPIN4	Q56A73	249 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	C6orf163	Q5TEZ5	329 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CLEC6A	Q6EIG7	209 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	GALNT12	Q8IXK2	581 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PSD4	Q8NDX1	1056 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CDC26	Q8NHZ8	85 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	NUBPL	Q8TB37	319 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MECR	Q9BV79	373 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	BRINP2	Q9C0B6	783 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PFDN4	Q9NQP4	134 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	HEY2	Q9UBP5	337 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	RAB21	Q9UL25	225 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	PSME2	Q9UL46	239 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	DLGAP4	Q9Y2H0	992 aa		13.1	□□□□□ -0.31
CCHCR1-222	ENST00000507459	LRRK2	Q5S007	2527 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459		G3V3Y1	287 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	UROS	P10746	265 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF24	P17028	368 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	CSNK2A2	P19784	350 aa	Predicted RBP	13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	TIA1	P31483	386 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	SLC37A1	P57057	533 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	ZNF844	Q08AG5	666 aa		13.09	□□□□□ -0.31
CCHCR1-222	ENST00000507459	MPEG1	Q2M385	716 aa		13.09	□□□□□ -0.31

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