RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 COPEO14579 308 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ZNHIT1O43257 154 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ASNA1O43681 348 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ZG16O60844 167 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 CDH16O75309 829 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ULK1O75385 1050 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 CLPSP04118 112 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 HSD3B1P14060 373 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF24P17028 368 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 HSD3B2P26439 372 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 HMOX2P30519 316 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 GALNSP34059 522 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 PKNOX1P55347 436 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 SLC37A1P57057 533 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 CSTF3Q12996 717 aaKnown RBP11.94□□□□□ -0.5
HDAC1-209ENST00000484305 MPEG1Q2M385 716 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 CCDC153Q494R4 210 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 PIGGQ5H8A4 983 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 GPALPP1Q8IXQ4 340 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 C4orf33Q8N1A6 199 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 OR4K14Q8NGD5 310 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 NUBPLQ8TB37 319 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 AGAP11Q8TF27 550 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 TM4SF18Q96CE8 201 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 CCDC126Q96EE4 140 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ART5Q96L15 291 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 ACPTQ9BZG2 426 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 CXorf21Q9HAI6 301 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.94□□□□□ -0.5
HDAC1-209ENST00000484305 SH3BGRL2Q9UJC5 107 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 CES1P1Q9UKY3 287 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 STK38LQ9Y2H1 464 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 PCDHA9Q9Y5H5 950 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 V9GYY5 206 aaPredicted RBP11.94□□□□□ -0.5
HDAC1-209ENST00000484305 PCNX1Q96RV3 2341 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF407Q9C0G0 2248 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 C1orf226A1L170 272 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 PINLYPA6NC86 204 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 G3V3Y1 287 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 SLC19A2O60779 497 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 GUCY1B2O75343 617 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 NADKO95544 446 aaPredicted RBP11.93□□□□□ -0.5
HDAC1-209ENST00000484305 ESRRBO95718 433 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 ENO1P06733 434 aaKnown RBP11.93□□□□□ -0.5
HDAC1-209ENST00000484305 CT62P0C5K7 136 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 CPMP14384 443 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 CPA3P15088 417 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 SSTR4P31391 388 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 CA7P43166 264 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 XKP51811 444 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 NAGLUP54802 743 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 FOXA1P55317 472 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 PER3P56645 1201 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 RAE1P78406 368 aaKnown RBP11.93□□□□□ -0.5
HDAC1-209ENST00000484305 HSF1Q00613 529 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 HMGCS1Q01581 520 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 SLC18A2Q05940 514 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 RBPJQ06330 500 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 SLC48A1Q6P1K1 146 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 SCIMPQ6UWF3 145 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 RNF111Q6ZNA4 994 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 POGLUT1Q8NBL1 392 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 C16orf52Q8NHV5 167 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 AENQ8WTP8 325 aaKnown RBP11.93□□□□□ -0.5
HDAC1-209ENST00000484305 GAL3ST4Q96RP7 486 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
HDAC1-209ENST00000484305 OXSMQ9NWU1 459 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 NBPF19A0A087WUL8 3843 aa11.93□□□□□ -0.5
HDAC1-209ENST00000484305 NINQ8N4C6 2090 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 A0A0G2JMM0 328 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 A0A1W2PPB8 328 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 A0A1W2PRS3 328 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 KIR3DP1A8MWS1 328 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 TFECO14948 347 aaPredicted RBP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 HS6ST1O60243 411 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 SLU7O95391 586 aaKnown RBP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 NUDT17P0C025 328 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 PORP16435 677 aaPredicted RBP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 COL8A1P27658 744 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 PTGER1P34995 402 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 DNAJB13P59910 316 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 EBPQ15125 230 aaKnown RBP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 C3AR1Q16581 482 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 FAM180BQ6P0A1 224 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 WDR93Q6P2C0 686 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 OPN5Q6U736 354 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 LYPD8Q6UX82 237 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 RTL4Q6ZR62 310 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 FRMD7Q6ZUT3 714 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 SLC29A4Q7RTT9 530 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 MAMDC2Q7Z304 686 aaPredicted RBP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 SPPL2CQ8IUH8 684 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 CHERPQ8IWX8 916 aaKnown RBP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 GALNT12Q8IXK2 581 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 GHDCQ8N2G8 530 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 GBP7Q8N8V2 638 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms