RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 TXNDC15Q96J42 360 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 SUSD3Q96L08 255 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 TEX10Q9NXF1 929 aaPredicted RBP11.59□□□□□ -0.55
PCF11-201ENST00000298281 DCAF16Q9NXF7 216 aa11.59□□□□□ -0.55
PCF11-201ENST00000298281 ESPL1Q14674 2120 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 SMPD1P17405 629 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ANXA7P20073 488 aaKnown RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 FCER1GP30273 86 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 KCNC3Q14003 757 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ZNF630Q2M218 657 aaPredicted RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 OR8D2Q9GZM6 311 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 DPEP3Q9H4B8 488 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 POT1Q9NUX5 634 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 DNAJC27Q9NZQ0 273 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 CACNA1CQ13936 2221 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 NUDT7P0C024 238 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ABOP16442 354 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ENGP17813 658 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 POU3F4P49335 361 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 FPGSQ05932 587 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 PTPRRQ15256 657 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ITPRIPL2Q3MIP1 535 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 SFRP5Q5T4F7 317 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 PAQR3Q6TCH7 311 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ZNF695Q8IW36 515 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 DBF4BQ8NFT6 615 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 FANK1Q8TC84 345 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 LRIG1Q96JA1 1093 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 MKS1Q9NXB0 559 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 MS4A12Q9NXJ0 267 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 SCN2AQ99250 2005 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 CREB1P16220 341 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 CD72P21854 359 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 PTPRCAPQ14761 206 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 FLYWCH1Q4VC44 716 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 C3orf38Q5JPI3 329 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 RDH10Q8IZV5 341 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 TSPEARQ8WU66 669 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 TFAP2BQ92481 460 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 TGM7Q96PF1 710 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 OTOFQ9HC10 1997 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 D6RAR5 112 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 K7EPK0 472 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 M0QX08 132 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 CCL22O00626 93 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 FBLP22087 321 aaKnown RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 CRHBPP24387 322 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 HOXA9P31269 272 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ABHD18Q0P651 414 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 PLA2G7Q13093 441 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 FAM71E2Q8N5Q1 922 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■■■■ 35.3
PCF11-201ENST00000298281 CAPNS2Q96L46 248 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 TPT1P8Q9HAU6 139 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 LIN7CQ9NUP9 197 aaKnown RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 UPK3BL1B0FP48 263 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 UPK3BL2E5RIL1 263 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 LRRN3E7EW58 273 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 SCO2O43819 266 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 SOX2P48431 317 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 CDK6Q00534 326 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 MZT1Q08AG7 82 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ARHGAP19Q14CB8 494 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 NPTX1Q15818 432 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 SMG8Q8ND04 991 aaKnown RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 STEAP2Q8NFT2 490 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ST7LQ8TDW4 575 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 TAMM41Q96BW9 452 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 METTL2AQ96IZ6 378 aaKnown RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 C2orf42Q9NWW7 574 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 WIF1Q9Y5W5 379 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 PPLO60437 1756 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 KLRG2A4D1S0 409 aaPredicted RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 C9JVG2 144 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 EI24O14681 340 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 IFNA17P01571 189 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 UNGP13051 313 aaPredicted RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 PTGIRP43119 386 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 UBE2G2P60604 165 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 RNF220Q5VTB9 566 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 NCEH1Q6PIU2 408 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 ASB15Q8WXK1 588 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 SLCO2A1Q92959 643 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 URM1Q9BTM9 101 aaKnown RBP11.58□□□□□ -0.56
PCF11-201ENST00000298281 SLC2A11Q9BYW1 496 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 PDE7BQ9NP56 450 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 GJD2Q9UKL4 321 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 Q9Y3F1 56 aa11.58□□□□□ -0.56
PCF11-201ENST00000298281 TCRBV7S2A1N4TA0A589 114 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 OR6C74A6NCV1 312 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 FAM205BPQ63HN1 556 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 STON2Q8WXE9 905 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 FAM84AQ96KN4 292 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 TMEM246Q9BRR3 403 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 ACTR3BQ9P1U1 418 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms