RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CCNYL2Q5T2Q4 361 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 C1QL3Q5VWW1 255 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 GPRIN3Q6ZVF9 776 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 COMMD6Q7Z4G1 85 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 SULF2Q8IWU5 870 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 ST13P4Q8IZP2 240 aaPredicted RBP11.97□□□□□ -0.49
HDAC1-209ENST00000484305 CNPY4Q8N129 248 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 CYP4Z2PQ8N1L4 340 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 FAM98AQ8NCA5 519 aaKnown RBP11.97□□□□□ -0.49
HDAC1-209ENST00000484305 C7orf57Q8NEG2 295 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 OR8K3Q8NH51 312 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 RASL10BQ96S79 203 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF382Q96SR6 550 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 C12orf65Q9H3J6 166 aaKnown RBP11.97□□□□□ -0.49
HDAC1-209ENST00000484305 WDR41Q9HAD4 459 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 BRF2Q9HAW0 419 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 AHSPQ9NZD4 102 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 COPS7AQ9UBW8 275 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 PLEKHB1Q9UF11 243 aaPredicted RBP11.97□□□□□ -0.49
HDAC1-209ENST00000484305 ADAM29Q9UKF5 820 aa11.97□□□□□ -0.49
HDAC1-209ENST00000484305 NPIPA5E9PKD4 350 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 OR10H2O60403 315 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF354AO60765 605 aaPredicted RBP11.96□□□□□ -0.49
HDAC1-209ENST00000484305 GLRA3O75311 464 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 OR6B1O95007 311 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 PROCP04070 461 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 CHN1P15882 459 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 SOX3P41225 446 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 MEOX1P50221 254 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 VSNL1P62760 191 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 TBL3Q12788 808 aaKnown RBP11.96□□□□□ -0.49
HDAC1-209ENST00000484305 ZNF267Q14586 743 aaPredicted RBP11.96□□□□□ -0.49
HDAC1-209ENST00000484305 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 IL20RBQ6UXL0 311 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 ZYG11AQ6WRX3 759 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 PAGE2Q7Z2X7 111 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 FJX1Q86VR8 437 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 SIAH3Q8IW03 269 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 C9orf40Q8IXQ3 194 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 ASB15Q8WXK1 588 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 FBXL20Q96IG2 436 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 GPR137Q96N19 417 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 KCNA7Q96RP8 456 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 GSTO2Q9H4Y5 243 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 PPCSQ9HAB8 311 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 VPS29Q9UBQ0 182 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 NPIPA1Q9UND3 350 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 ERVK-11Q9UQG0 969 aa11.96□□□□□ -0.49
HDAC1-209ENST00000484305 KLF13Q9Y2Y9 288 aaPredicted RBP11.96□□□□□ -0.49
HDAC1-209ENST00000484305 A8MVJ9 347 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 UBFD1O14562 309 aaKnown RBP11.95□□□□□ -0.5
HDAC1-209ENST00000484305 DYRK3O43781 588 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 PEX1O43933 1283 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 PLIN3O60664 434 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 MLYCDO95822 493 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 CLDN1O95832 211 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 KRT6AP02538 564 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 KRT6BP04259 564 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 SLC35E2P0CK97 266 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 MYL2P10916 166 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 KRT4P19013 534 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 PIK3R1P27986 724 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 CRHR1P34998 444 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 RFC3P40938 356 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 CCT5P48643 541 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 KRT6CP48668 564 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 HTR6P50406 440 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 MAPK12P53778 367 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 GPR85P60893 370 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 ERVK-8P63133 956 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 ASPHQ12797 758 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 LCP2Q13094 533 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 SPRED3Q2MJR0 410 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF750Q32MQ0 723 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 KRTCAP3Q53RY4 240 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 NDUFAF5Q5TEU4 345 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 OR52E8Q6IFG1 317 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 MMP21Q8N119 569 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 C1orf52Q8N6N3 182 aaKnown RBP11.95□□□□□ -0.5
HDAC1-209ENST00000484305 CCNYL1Q8N7R7 359 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 PSD4Q8NDX1 1056 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 OR5L2Q8NGL0 311 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 OR2W6PQ8NHA6 318 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 METTL6Q8TCB7 284 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 CHTF18Q8WVB6 975 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 RIT1Q92963 219 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 RELTQ969Z4 430 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 PELOQ9BRX2 385 aaKnown RBP11.95□□□□□ -0.5
HDAC1-209ENST00000484305 CNPPD1Q9BV87 410 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 TIMMDC1Q9NPL8 285 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 DEPPQ9NTK1 212 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 NMRK1Q9NWW6 199 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 HPF1Q9NWY4 346 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 GRID1Q9ULK0 1009 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 ERVK-19Q9WJR5 959 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 TIMM22Q9Y584 194 aa11.95□□□□□ -0.5
HDAC1-209ENST00000484305 TRGV8A0A0C4DH27 118 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 A0A1B0GUH1 482 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 TLDC2A0PJX2 215 aa11.94□□□□□ -0.5
HDAC1-209ENST00000484305 KLRC4-KLRK1H3BQV0 150 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms