RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZNF749O43361 778 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 HTATSF1O43719 755 aaKnown RBP3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 ANXA9O76027 345 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CXCL14O95715 111 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 FHP07954 510 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CCDC192P0DO97 292 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 ACADSBP45954 432 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 SRP54P61011 504 aaKnown RBP3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 RAPSNQ13702 412 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 SLC17A1Q14916 467 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CARTPTQ16568 116 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 GPAT3Q53EU6 434 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 MUC21Q5SSG8 566 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 FAM182AQ5T1J6 154 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 PRAMEF7Q5VXH5 474 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CARM1Q86X55 608 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 PARP8Q8N3A8 854 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CCNYQ8ND76 341 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 OR8H1Q8NGG4 311 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 KIAA1524Q8TCG1 905 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 MIPOL1Q8TD10 442 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CHPT1Q8WUD6 406 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 RAB39BQ96DA2 213 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 MRPL53Q96EL3 112 aaKnown RBP3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CDHR1Q96JP9 859 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 SPATA13Q96N96 652 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 RUNDC3BQ96NL0 473 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 TNMDQ9H2S6 317 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 TUBB1Q9H4B7 451 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 DPEP3Q9H4B8 488 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 GTSE1Q9NYZ3 720 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 NDUFA13Q9P0J0 144 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 KCNN3Q9UGI6 736 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 FAM153AQ9UHL3 310 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 MMP24Q9Y5R2 645 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 NOTCH3Q9UM47 2321 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 IGHV3OR16-10A0A075B7F0 116 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 TRGV8A0A0C4DH27 118 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 MEI4A8MW99 385 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 AHCYP23526 432 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 ID1P41134 155 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 TNFRSF4P43489 277 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 PITPNBP48739 271 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 LIMK2P53671 638 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 NDUFV3P56181 108 aaKnown RBP3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 YBEYP58557 167 aaPredicted RBP3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 RPL27P61353 136 aaKnown RBP3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 MSLNQ13421 630 aaPredicted RBP3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 P2RY14Q15391 338 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 CCDC40Q4G0X9 1142 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 RAB12Q6IQ22 244 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 TATDN1Q6P1N9 297 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 Q6ZRG5 221 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 GPATCH11Q8N954 259 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 TMEM185AQ8NFB2 350 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 OR1B1Q8NGR6 318 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 C16orf58Q96GQ5 468 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 RCHY1Q96PM5 261 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 TAAR6Q96RI8 345 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 DCTN5Q9BTE1 182 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 CARD9Q9H257 536 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 CXXC4Q9H2H0 198 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 SYTL2Q9HCH5 934 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 CTSZQ9UBR2 303 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 COPS7AQ9UBW8 275 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 RARRES3Q9UL19 164 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 CCPG1Q9ULG6 757 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 MGAT4AQ9UM21 535 aa3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 DIMT1Q9UNQ2 313 aaKnown RBP3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 RPH3AQ9Y2J0 694 aaPredicted RBP3.77□□□□□ -1.81
SMNDC1-205ENST00000477763 KIF7Q2M1P5 1343 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 RPGRIP1LQ68CZ1 1315 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 COL2A1P02458 1487 aaPredicted RBP3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 LOC390937A0A1W2PQ73 354 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 SH3PXD2BA1X283 911 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 ARHGAP42A6NI28 874 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 TSPAN2O60636 221 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 HPRP00739 348 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF10P21506 573 aaPredicted RBP3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 TAF6P49848 677 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 PAX8Q06710 450 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 FCHO2Q0JRZ9 810 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 EXOSC7Q15024 291 aaKnown RBP3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 LPAL2Q16609 132 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 GLIPR1L2Q4G1C9 344 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 HERC4Q5GLZ8 1057 aaPredicted RBP3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 TEX35Q5T0J7 233 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 CDC42EP5Q6NZY7 148 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 TAF8Q7Z7C8 310 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 ADAMTSL2Q86TH1 951 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 GTSCR1Q86UQ5 136 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 ITIH5Q86UX2 942 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 WDR49Q8IV35 697 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 PHC2Q8IXK0 858 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 LINC00518Q8N0U6 118 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 FBXO25Q8TCJ0 367 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 U2AF1L4Q8WU68 220 aaKnown RBP3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC13A3Q8WWT9 602 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms