RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 BIRC5O15392 142 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 PCDH7O60245 1069 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 PRAMEF2O60811 474 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 VPS4BO75351 444 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 DRD2P14416 443 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 TRHRP34981 398 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-202ENST00000368687 ETV4P43268 484 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 MLF1P58340 268 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 KCNC4Q03721 635 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 HEPACAMQ14CZ8 416 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 EXOC3L1Q86VI1 746 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 KIF2BQ8N4N8 673 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 GALNT11Q8NCW6 608 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 SLC2A12Q8TD20 617 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 FBXL20Q96IG2 436 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 KCNA7Q96RP8 456 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 OR8D2Q9GZM6 311 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 CDCP1Q9H5V8 836 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 CLMPQ9H6B4 373 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 PFDN4Q9NQP4 134 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 TEX10Q9NXF1 929 aaPredicted RBP17.25■□□□□ 0.35
CHTOP-202ENST00000368687 VPS4AQ9UN37 437 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 PCDHA9Q9Y5H5 950 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 CSAG2Q9Y5P2 127 aa17.25■□□□□ 0.35
CHTOP-202ENST00000368687 COPG1Q9Y678 874 aaKnown RBP17.25■□□□□ 0.35
CHTOP-202ENST00000368687 NPIPB8E9PQR5 432 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 SLC28A1O00337 649 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 RGS14O43566 566 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 BPGMP07738 259 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 FGF4P08620 206 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 CD46P15529 392 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 PRPH2P23942 346 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 TIA1P31483 386 aaKnown RBP eCLIP17.24■□□□□ 0.353e-7■■□□□ 13.8
CHTOP-202ENST00000368687 CYB561P49447 251 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 HTR6P50406 440 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 FOXA1P55317 472 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 TUBA3CQ13748 450 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 SPDYAQ5MJ70 313 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 FCRLBQ6BAA4 426 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 SLC48A1Q6P1K1 146 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 TUBA3EQ6PEY2 450 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 FAM180AQ6UWF9 173 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 GPALPP1Q8IXQ4 340 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 TMEM178AQ8NBL3 297 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 PPP1R14CQ8TAE6 165 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 RIT1Q92963 219 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 C5orf34Q96MH7 638 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 CCT7Q99832 543 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 TRIM45Q9H8W5 580 aaPredicted RBP17.24■□□□□ 0.35
CHTOP-202ENST00000368687 ARGLU1Q9NWB6 273 aaPredicted RBP17.24■□□□□ 0.35
CHTOP-202ENST00000368687 PLA2G3Q9NZ20 509 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 LUZP4Q9P127 313 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 MAP10Q9P2G4 905 aa17.24■□□□□ 0.35
CHTOP-202ENST00000368687 YARS2Q9Y2Z4 477 aaKnown RBP17.24■□□□□ 0.35
CHTOP-202ENST00000368687 GLOD5A6NK44 160 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 OR6C76A6NM76 312 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 DDAH2O95865 285 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 SERPINB4P48594 390 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 HMGCS1Q01581 520 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 ID2Q02363 134 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 OC90Q02509 493 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-202ENST00000368687 ZNF763Q0D2J5 394 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 KANK2Q63ZY3 851 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 NUDCD3Q8IVD9 361 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 OR4N5Q8IXE1 308 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 CLYBLQ8N0X4 340 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 BCORP1Q8N888 145 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 FAM98AQ8NCA5 519 aaKnown RBP17.23■□□□□ 0.35
CHTOP-202ENST00000368687 NUBPLQ8TB37 319 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 TM4SF18Q96CE8 201 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 SNRNP40Q96DI7 357 aaKnown RBP17.23■□□□□ 0.35
CHTOP-202ENST00000368687 C11orf24Q96F05 449 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-202ENST00000368687 SENP5Q96HI0 755 aaPredicted RBP17.23■□□□□ 0.35
CHTOP-202ENST00000368687 MECRQ9BV79 373 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 EHD3Q9NZN3 535 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 MYOTQ9UBF9 498 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 ZNF780BQ9Y6R6 833 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 SHANK1Q9Y566 2161 aa17.23■□□□□ 0.35
CHTOP-202ENST00000368687 PRKRAO75569 313 aaKnown RBP17.22■□□□□ 0.35
CHTOP-202ENST00000368687 CRYABP02511 175 aaKnown RBP17.22■□□□□ 0.35
CHTOP-202ENST00000368687 CREB1P16220 341 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 PORP16435 677 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-202ENST00000368687 CSNK2A2P19784 350 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-202ENST00000368687 GRK2P25098 689 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 HLCSP50747 726 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 OR1C1Q15619 314 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 IGFBP7Q16270 282 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 ARL13AQ5H913 290 aaPredicted RBP17.22■□□□□ 0.35
CHTOP-202ENST00000368687 ZNF766Q5HY98 468 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 IKBIPQ70UQ0 350 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 GALNT12Q8IXK2 581 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 TMEM156Q8N614 296 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 MDS2Q8NDY4 140 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 CATSPER1Q8NEC5 780 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 ZNF721Q8TF20 911 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 TMEM125Q96AQ2 219 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 APIPQ96GX9 242 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 BARD1Q99728 777 aaKnown RBP17.22■□□□□ 0.35
CHTOP-202ENST00000368687 NPAS2Q99743 824 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 GIMAP4Q9NUV9 329 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms