RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MARK1Q9P0L2 795 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 STUB1Q9UNE7 303 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 ZNF232Q9UNY5 417 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 RPL36Q9Y3U8 105 aaKnown RBP8.27□□□□□ -1.09
CLK1-201ENST00000321356 SNX11Q9Y5W9 270 aa8.27□□□□□ -1.09
CLK1-201ENST00000321356 PDE4DIPQ5VU43 2346 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 C17orf113A0A1B0GUU1 675 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 FAM47E-STBD1D6RA91 191 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 K7ESM1 405 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 HMGN4O00479 90 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 MMP20O60882 483 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 MOSPD3O75425 235 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SOX14O95416 240 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PAPLNO95428 1278 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 LGI1O95970 557 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 CKMT1AP12532 417 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PSMA1P25786 263 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 PPM1AP35813 382 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 FEN1P39748 380 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 NNMTP40261 264 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 RORCP51449 518 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 XKP51811 444 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PCBP4P57723 403 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 OR2B6P58173 313 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 WDR5P61964 334 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 ALDH6A1Q02252 535 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 ZNF77Q15935 545 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PRAMEF14Q5SWL7 426 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 C1QTNF12Q5T7M4 302 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PRAMEF13Q5VWM6 474 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 RSBN1Q5VWQ0 802 aaPredicted RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 KHDRBS2Q5VWX1 349 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 NXNL2Q5VZ03 156 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TNFAIP8L2Q6P589 184 aaPredicted RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 CASP12Q6UXS9 341 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TMPRSS11AQ6ZMR5 421 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 NRARPQ7Z6K4 114 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TRAPPC5Q8IUR0 188 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SLC34A3Q8N130 599 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 Q8N9G6 341 aaPredicted RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 KREMEN2Q8NCW0 462 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 OR4D11Q8NGI4 311 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SLC7A13Q8TCU3 470 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 FGF11Q92914 225 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TM4SF18Q96CE8 201 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TCEAL4Q96EI5 215 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 ZNF514Q96K75 400 aaPredicted RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 TEFMQ96QE5 360 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 MS4A8Q9BY19 250 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 ZDHHC5Q9C0B5 715 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SRRQ9GZT4 340 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 POLR2J3Q9H1A7 115 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 TP63Q9H3D4 680 aaPredicted RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 DPEP2Q9H4A9 486 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 CREBZFQ9NS37 354 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TDP1Q9NUW8 608 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 HCFC1R1Q9NWW0 138 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 AHSPQ9NZD4 102 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 MUTYHQ9UIF7 546 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 DIMT1Q9UNQ2 313 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 CCL16O15467 120 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PDPK1O15530 556 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SEC14L5O43304 696 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 OR10H3O60404 316 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 ERGP11308 486 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 DDX6P26196 483 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLK1-201ENST00000321356 BSGP35613 385 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 MAPK12P53778 367 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SMIM11AP58511 58 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 COPZ1P61923 177 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 DEFB103AP81534 67 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 EFNB1P98172 346 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 LARS2Q15031 903 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 POM121L1PQ3SYA9 428 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 ATAD3CQ5T2N8 411 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 FAM180BQ6P0A1 224 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 C6orf120Q7Z4R8 191 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 RBM45Q8IUH3 476 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 LAX1Q8IWV1 398 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 PHC2Q8IXK0 858 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 OR8H2Q8N162 312 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 KRT78Q8N1N4 520 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 FAM26EQ8N5C1 309 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 OR2L2Q8NH16 312 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 GPR151Q8TDV0 419 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 CAPSLQ8WWF8 208 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 RASSF5Q8WWW0 418 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SMPDL3AQ92484 453 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SNX18Q96RF0 628 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 WFDC6Q9BQY6 131 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TSSK6Q9BXA6 273 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 POLDIP3Q9BY77 421 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 OR2B2Q9GZK3 357 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 MCOLN1Q9GZU1 580 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 OR52A5Q9H2C5 316 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 SERHL2Q9H4I8 314 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 EXOSC4Q9NPD3 245 aaKnown RBP8.26□□□□□ -1.09
CLK1-201ENST00000321356 TBC1D14Q9P2M4 693 aa8.26□□□□□ -1.09
CLK1-201ENST00000321356 TESQ9UGI8 421 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms