RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 SPPL2BQ8TCT7 592 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 SHC3Q92529 594 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 SENP8Q96LD8 212 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 NSMCE2Q96MF7 247 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 DDX50Q9BQ39 737 aaKnown RBP4.32□□□□□ -1.72
CDRT1-208ENST00000630868 NUSAP1Q9BXS6 441 aaKnown RBP4.32□□□□□ -1.72
CDRT1-208ENST00000630868 COQ10BQ9H8M1 238 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 GPN1Q9HCN4 374 aaPredicted RBP4.32□□□□□ -1.72
CDRT1-208ENST00000630868 POLD4Q9HCU8 107 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 UBQLN2Q9UHD9 624 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 LAMP5Q9UJQ1 280 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 DNPEPQ9ULA0 475 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 UBQLN1Q9UMX0 589 aaKnown RBP4.32□□□□□ -1.72
CDRT1-208ENST00000630868 SMC3Q9UQE7 1217 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 KIF3AQ9Y496 699 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 SRPRBQ9Y5M8 271 aaKnown RBP4.32□□□□□ -1.72
CDRT1-208ENST00000630868 MYOFQ9NZM1 2061 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 PTPRBP23467 1997 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 ANAPC1Q9H1A4 1944 aa4.32□□□□□ -1.72
CDRT1-208ENST00000630868 USP9XQ93008 2570 aaPredicted RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 SHROOM3Q8TF72 1996 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 COL12A1Q99715 3063 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ANK1P16157 1881 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ILVBLA1L0T0 632 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ANTXRLA6NF34 631 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ARHGAP42A6NI28 874 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 CCDC169A6NNP5 214 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 PRSS46E5RG02 174 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 PIRO00625 290 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 PPEF2O14830 753 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 RIPK2O43353 540 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ATP6AP2O75787 350 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 NOL4O94818 638 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 WDPCPO95876 746 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 MBD3O95983 291 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 AK1P00568 194 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 PIGRP01833 764 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 SERPINF2P08697 491 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ODC1P11926 461 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 FUT1P19526 365 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 SYT1P21579 422 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 U2AF2P26368 475 aaKnown RBP eCLIP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 CDC25AP30304 524 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 AKT2P31751 481 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 STX2P32856 288 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 HSD17B3P37058 310 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ASMTP46597 345 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 CDX1P47902 265 aaPredicted RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ARCN1P48444 511 aaKnown RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 PEX3P56589 373 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 MRPS21P82921 87 aaKnown RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 HMGN5P82970 282 aaKnown RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 COG7P83436 770 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 LRRC74AQ0VAA2 488 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 PRKAA1Q13131 559 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 FOXE3Q13461 319 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 DPYSQ14117 519 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 VEZF1Q14119 521 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 HNF4GQ14541 408 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 INPP5JQ15735 1006 aaPredicted RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 UGP2Q16851 508 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 DUOXA1Q1HG43 343 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 LSM12Q3MHD2 195 aaKnown RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 CCDC40Q4G0X9 1142 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 LYSMD4Q5XG99 296 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ATL3Q6DD88 541 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ARMCX5Q6P1M9 558 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ZNF66Q6ZN08 573 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 DEF8Q6ZN54 512 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 Q6ZPA2 131 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 TTLL10Q6ZVT0 673 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 MON1BQ7L1V2 547 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ZNF367Q7RTV3 350 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 TMEM110Q86TL2 294 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 SYVN1Q86TM6 617 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ASPGQ86U10 573 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 AMZ2Q86W34 360 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 CFAP206Q8IYR0 622 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ARHGAP24Q8N264 748 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 C4orf32Q8N8J7 132 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 BANPQ8N9N5 519 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 TMEM174Q8WUU8 243 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 SLC38A5Q8WUX1 472 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 WASF1Q92558 559 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 FIG4Q92562 907 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 MRPS31Q92665 395 aaKnown RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 PROX1Q92786 737 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 MTERF3Q96E29 417 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 RASL10BQ96S79 203 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 ASCL2Q99929 193 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 TCHPQ9BT92 498 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 TIPINQ9BVW5 301 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 SLC39A8Q9C0K1 460 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 SNX25Q9H3E2 840 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 CATSPERBQ9H7T0 1116 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 Q9H8V8 135 aa4.31□□□□□ -1.72
CDRT1-208ENST00000630868 RPF1Q9H9Y2 349 aaKnown RBP4.31□□□□□ -1.72
CDRT1-208ENST00000630868 TMEM184CQ9NVA4 438 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms