RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 KRT86O43790 486 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 VPS26AO75436 327 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 E2F6O75461 281 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 IDH1O75874 414 aaKnown RBP4.47□□□□□ -1.69
LINC00397-202ENST00000606785 EML2O95834 649 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 GLRA1P23415 457 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 SOX6P35712 828 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 FEN1P39748 380 aaKnown RBP4.47□□□□□ -1.69
LINC00397-202ENST00000606785 ACADSBP45954 432 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 HNMTP50135 292 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 LIMK2P53671 638 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 KRTAP10-11P60412 298 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 BTG1P62324 171 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 COX10Q12887 443 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 NME3Q13232 169 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 KRT81Q14533 505 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 C3AR1Q16581 482 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 ZSCAN26Q16670 478 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 GTDC1Q4AE62 458 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 SPANXN4Q5MJ08 99 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 ZNF324BQ6AW86 544 aaPredicted RBP4.47□□□□□ -1.69
LINC00397-202ENST00000606785 WBP2NLQ6ICG8 309 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 CACUL1Q86Y37 369 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 OR10G8Q8NGN5 311 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 C8orf46Q8TAG6 207 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 CHPT1Q8WUD6 406 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 P3H4Q92791 437 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 TMEM45BQ96B21 275 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 GSDMAQ96QA5 445 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 GPA33Q99795 319 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 ZNF416Q9BWM5 594 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 HIPK2Q9H2X6 1198 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 FNDC4Q9H6D8 234 aaPredicted RBP4.47□□□□□ -1.69
LINC00397-202ENST00000606785 TRPV5Q9NQA5 729 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 YAE1D1Q9NRH1 226 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.47□□□□□ -1.69
LINC00397-202ENST00000606785 ZMAT5Q9UDW3 170 aaKnown RBP4.47□□□□□ -1.69
LINC00397-202ENST00000606785 MFHAS1Q9Y4C4 1052 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 ATG4BQ9Y4P1 393 aa4.47□□□□□ -1.69
LINC00397-202ENST00000606785 ABCC4O15439 1325 aa4.46□□□□□ -1.69
LINC00397-202ENST00000606785 NEDD4P46934 1319 aa4.46□□□□□ -1.69
LINC00397-202ENST00000606785 FGD5Q6ZNL6 1462 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 PIK3R4Q99570 1358 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 SYNJ2BP-COX16A0A087WUM0 186 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 A0A0G2JLW4 131 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 A0A1B0GUV1 79 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 BOLA2-SMG1P6H3BVE0 249 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 BUB3O43684 328 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 FGF17O60258 216 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 LRCH4O75427 683 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 TOM1L1O75674 476 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 CDC123O75794 336 aaPredicted RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 FGF19O95750 216 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 CALCBP10092 127 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 RRASP10301 218 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 FGF3P11487 239 aaPredicted RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 IL4RP24394 825 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 SOX3P41225 446 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 GTF2A1P52655 376 aaPredicted RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 BTG3Q14201 252 aaPredicted RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF528Q3MIS6 628 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 LIPKQ5VXJ0 399 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 SLC35E4Q6ICL7 350 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 C19orf48Q6RUI8 117 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 SH2D5Q6ZV89 423 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 Q6ZVQ6 151 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 TMEM110Q86TL2 294 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 DND1Q8IYX4 353 aaKnown RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 PARP8Q8N3A8 854 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 BANPQ8N9N5 519 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 FAM184AQ8NB25 1140 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 ADAD2Q8NCV1 583 aaKnown RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 GOLGA5Q8TBA6 731 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 CCDC51Q96ER9 411 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 PCED1BQ96HM7 432 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 C2orf48Q96LS8 159 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 ERP44Q9BS26 406 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 C3orf14Q9HBI5 128 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF624Q9P2J8 865 aaPredicted RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 EXTL2Q9UBQ6 330 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 RRP15Q9Y3B9 282 aaKnown RBP4.46□□□□□ -1.7
LINC00397-202ENST00000606785 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.7
LINC00397-202ENST00000606785 A0A0U1RQV5 110 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 hCG_38984A0A1B0GV85 526 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 SH3PXD2BA1X283 911 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 ANKRD30BLA7E2S9 258 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 TCP10L2B9ZVM9 353 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 H0YCG3 227 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 LGALS8O00214 317 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 ACOT8O14734 319 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 INSIG1O15503 277 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 B4GAT1O43505 415 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 TRMUO75648 421 aaKnown RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 NTN1O95631 604 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 APBB3O95704 486 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 PCCBP05166 539 aa4.45□□□□□ -1.7
LINC00397-202ENST00000606785 F7P08709 466 aaPredicted RBP4.45□□□□□ -1.7
LINC00397-202ENST00000606785 THRBP10828 461 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms