RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 RASSF4Q9H2L5 321 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 CXorf36Q9H7Y0 433 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 SIRT3Q9NTG7 399 aaPredicted RBP19.62■□□□□ 0.73
PNKP-203ENST00000593946 PSME2Q9UL46 239 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 CORO2BQ9UQ03 480 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 ENTPD4Q9Y227 616 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 SNX13Q9Y5W8 968 aa19.62■□□□□ 0.73
PNKP-203ENST00000593946 OTOGLQ3ZCN5 2332 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 FER1L5A0AVI2 2057 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 FAM220BPB1ANY3 271 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 CDX4O14627 284 aaPredicted RBP19.61■□□□□ 0.73
PNKP-203ENST00000593946 FKBP6O75344 327 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 CKMT2P17540 419 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 ATP6V1B2P21281 511 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 RAB38P57729 211 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 HSPB3Q12988 150 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 SERPINA11Q86U17 422 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 ENDOVQ8N8Q3 282 aaKnown RBP19.61■□□□□ 0.73
PNKP-203ENST00000593946 TTC29Q8NA56 475 aaPredicted RBP19.61■□□□□ 0.73
PNKP-203ENST00000593946 OR1L3Q8NH93 324 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 SUN3Q8TAQ9 357 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 ZNF681Q96N22 645 aa19.61■□□□□ 0.73
PNKP-203ENST00000593946 COL25A1Q9BXS0 654 aaPredicted RBP19.61■□□□□ 0.73
PNKP-203ENST00000593946 NTN3O00634 580 aaPredicted RBP19.6■□□□□ 0.73
PNKP-203ENST00000593946 STAMBPO95630 424 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 LDOC1O95751 146 aaPredicted RBP19.6■□□□□ 0.73
PNKP-203ENST00000593946 UQCRC2P22695 453 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 GCGRP47871 477 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 SHC2P98077 582 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 DUSP2Q05923 314 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 AAGABQ6PD74 315 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 CYP2R1Q6VVX0 501 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 SHISA5Q8N114 240 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 TNIP2Q8NFZ5 429 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 ZFP28Q8NHY6 868 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 PNPT1Q8TCS8 783 aaKnown RBP19.6■□□□□ 0.73
PNKP-203ENST00000593946 ZNF501Q96CX3 271 aaPredicted RBP19.6■□□□□ 0.73
PNKP-203ENST00000593946 SYNDIG1Q9H7V2 258 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 FGF21Q9NSA1 209 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 GIMAP4Q9NUV9 329 aa19.6■□□□□ 0.73
PNKP-203ENST00000593946 COL27A1Q8IZC6 1860 aaPredicted RBP19.6■□□□□ 0.73
PNKP-203ENST00000593946 A0A1W2PS29 197 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 H0Y3Z8 333 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 CHST10O43529 356 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 C8BP07358 591 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 GP1BAP07359 652 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 CSNK2A2P19784 350 aaPredicted RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 ACP1P24666 158 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 CDK9P50750 372 aaKnown RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 NCBP2P52298 156 aaKnown RBP eCLIP19.59■□□□□ 0.73
PNKP-203ENST00000593946 MVDP53602 400 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 ITGA1P56199 1179 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 SIM1P81133 766 aaPredicted RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 SPIDRQ14159 915 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 RCN1Q15293 331 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 RGNQ15493 299 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 FAM214AQ32MH5 1076 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 ZNF750Q32MQ0 723 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 OR5AK3PQ8NH89 298 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 RHBDD1Q8TEB9 315 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 PYDC1Q8WXC3 89 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 REXO5Q96IC2 774 aaKnown RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 CCDC74BQ96LY2 380 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 GFM1Q96RP9 751 aaKnown RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 CHST8Q9H2A9 424 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 EPS8L2Q9H6S3 715 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 CLK4Q9HAZ1 481 aaKnown RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 GPATCH2Q9NW75 528 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 NKX1-2Q9UD57 310 aaPredicted RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 MAGEL2Q9UJ55 1249 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 ACSL6Q9UKU0 697 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 ZNF780BQ9Y6R6 833 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 TCRBV3S1A0A5B6 114 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 ELOVL7A1L3X0 281 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 D6RAR5 112 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 NTRK1P04629 796 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 C8orf89P0DMQ9 161 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 GGT1P19440 569 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 SOAT1P35610 550 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 SOX11P35716 441 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 MRPS22P82650 360 aaKnown RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 TCF15Q12870 199 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 SNCBQ16143 134 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 AASDHQ4L235 1098 aaPredicted RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 TLDC1Q6P9B6 456 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 SPATA24Q86W54 205 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 PROSER1Q86XN7 944 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 MICU2Q8IYU8 434 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 GPR135Q8IZ08 494 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 SAMD14Q8IZD0 417 aaPredicted RBP19.59■□□□□ 0.73
PNKP-203ENST00000593946 TMEM52Q8NDY8 209 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 OR4K14Q8NGD5 310 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 OR52N2Q8NGI0 321 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 LRGUKQ96M69 825 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 TRIM15Q9C019 465 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 FANCEQ9HB96 536 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 S100A14Q9HCY8 104 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 CUTCQ9NTM9 273 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 SNX8Q9Y5X2 465 aa19.59■□□□□ 0.73
PNKP-203ENST00000593946 RNF103-CHMP3A0A140T963 221 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms