RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 POM121L1PQ3SYA9 428 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 MED27Q6P2C8 311 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 MEX3DQ86XN8 651 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 HORMAD2Q8N7B1 307 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 PCSK9Q8NBP7 692 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 NLGN4YQ8NFZ3 816 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 CREB3L4Q8TEY5 395 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 RAB8BQ92930 207 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 NELL2Q99435 816 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SLC6A16Q9GZN6 736 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SLC22A4Q9H015 551 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ABCG4Q9H172 646 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 TVP23BQ9NYZ1 205 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 KCND3Q9UK17 655 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SSR3Q9UNL2 185 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ANGPT4Q9Y264 503 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 A0A0X1KG70 313 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 IQCMA0A1B0GVH7 501 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 A0A1W2PRB8 838 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 SLC35F4A4IF30 521 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 FABP12A6NFH5 140 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TNNI3P19429 210 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 SDC2P34741 201 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 XKP51811 444 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 DSTNP60981 165 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TLE2Q04725 743 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF33BQ06732 778 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ASAH1Q13510 395 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 KCNC3Q14003 757 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 PYDC2Q56P42 97 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ATAT1Q5SQI0 421 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 OR2G6Q5TZ20 316 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 NPAS4Q8IUM7 802 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 RASGEF1AQ8N9B8 481 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 OR56A3Q8NH54 315 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 REPS1Q96D71 796 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 RIOK2Q9BVS4 552 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 MVB12BQ9H7P6 319 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TMEM39AQ9NV64 488 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 C5AR2Q9P296 337 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 CFAP97Q9P2B7 532 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 NDRG2Q9UN36 371 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 PPIL1Q9Y3C6 166 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 NUP210Q8TEM1 1887 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 OR6C70A6NIJ9 312 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 SMLR1H3BR10 107 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 MYL12BO14950 172 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TP53P04637 393 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ITGB7P26010 798 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 CST5P28325 142 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ATN1P54259 1190 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 SNRPGP62308 76 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 RPS25P62851 125 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 PDE7AQ13946 482 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 EFR3AQ14156 821 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 SLC35F1Q5T1Q4 408 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 C12orf73Q69YU5 71 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 FAM71E1Q6IPT2 247 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TCTN3Q6NUS6 607 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 USP30Q70CQ3 517 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 COMTD1Q86VU5 262 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 VWA5B2Q8N398 1253 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 FAM181AQ8N9Y4 354 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ATP6V1C2Q8NEY4 427 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF480Q8WV37 535 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 JPH3Q8WXH2 748 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TMEM159Q96B96 161 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 RNF121Q9H920 327 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 SLAMF7Q9NQ25 335 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 DMRT3Q9NQL9 472 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TOR4AQ9NXH8 423 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TAAR2Q9P1P5 351 aa11.16□□□□□ -0.62
PDZRN3-203ENST00000462146 TRAV19A0A0A6YYK7 116 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 MANSC4A6NHS7 340 aaPredicted RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 TMEM88BA6NKF7 163 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 PRRG1O14668 218 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 TLX2O43763 284 aaPredicted RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ABLIM3O94929 683 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 YES1P07947 543 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 TSPAN19P0C672 248 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 APEX1P27695 318 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 CD79BP40259 229 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 RPS5P46782 204 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ALDH9A1P49189 494 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 CHRNEQ04844 493 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 PCDH1Q08174 1060 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 E2F2Q14209 437 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 PDZK1Q5T2W1 519 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 MFSD4BQ5TF39 518 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ERAP2Q6P179 960 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 PGBD2Q6P3X8 592 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 SYCE2Q6PIF2 218 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 CASP12Q6UXS9 341 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 C11orf74Q86VG3 221 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ZFP41Q8N8Y5 198 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 OR52I1Q8NGK6 324 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms