RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 P2RX2Q9UBL9 471 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 NDRG4Q9ULP0 352 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 PCDHGA6Q9Y5G7 932 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SBF2Q86WG5 1849 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CHURC1-FNTBB4DL54 471 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ZNF865P0CJ78 1059 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 HLA-EP13747 358 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PIK3CBP42338 1070 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 NRIP1P48552 1158 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 NCBP2P52298 156 aaKnown RBP eCLIP10.08□□□□□ -0.8
USB1-212ENST00000566082 ACVR1Q04771 509 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PIN1Q13526 163 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 LASP1Q14847 261 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 TATDN3Q17R31 274 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLC35F1Q5T1Q4 408 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 GDPD4Q6W3E5 623 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 HSDL2Q6YN16 418 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CHMP1BQ7LBR1 199 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ZNF551Q7Z340 670 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 GALNT13Q8IUC8 556 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 OR52N2Q8NGI0 321 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 OR51G2Q8NGK0 314 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 YIPF6Q96EC8 236 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PDLIM5Q96HC4 596 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 SNX18Q96RF0 628 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLA2Q9H6Q3 261 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ELAC1Q9H777 363 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 C3orf14Q9HBI5 128 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ASAH2Q9NR71 780 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLC6A13Q9NSD5 602 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 RLIMQ9NVW2 624 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 NFKBIL1Q9UBC1 381 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 TMEFF2Q9UIK5 374 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 PLAGL1Q9UM63 463 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 GON4LQ3T8J9 2241 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 A0A1B0GVC2 190 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 NPIPB15A6NHN6 443 aaPredicted RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 A6NIN4 97 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 EEF1E1O43324 174 aaKnown RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 EFCAB14O75071 495 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 IGLV3-25P01717 112 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PCGF2P35227 344 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 UGT2B10P36537 528 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 ETV3P41162 512 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 SREBF2Q12772 1141 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 TRIM71Q2Q1W2 868 aaKnown RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 ARSIQ5FYB1 569 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 CNIH2Q6PI25 160 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 COMMD6Q7Z4G1 85 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 TRIM46Q7Z4K8 759 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 YIPF7Q8N8F6 280 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 GDPD1Q8N9F7 314 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 OR5H6Q8NGV6 325 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PSD2Q9BQI7 771 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 ZSCAN5AQ9BUG6 496 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 TTTY10Q9BZA0 68 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 HOXD1Q9GZZ0 328 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 IL20RAQ9UHF4 553 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 IFNA7P01567 189 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 SRPRAP08240 638 aaKnown RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 HTR1AP08908 422 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 CHRNB1P11230 501 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 OSMP13725 252 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 MAN2A2P49641 1150 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 ARF5P84085 180 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 FGFBP1Q14512 234 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PRAMEF14Q5SWL7 426 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PLEKHS1Q5SXH7 462 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PRAMEF13Q5VWM6 474 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 C8orf82Q6P1X6 216 aaPredicted RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 MSANTD1Q6ZTZ1 278 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PIAS4Q8N2W9 510 aaPredicted RBP10.07□□□□□ -0.8
USB1-212ENST00000566082 MFSD4AQ8N468 514 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 LMNTD1Q8N9Z9 388 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 OR7G1Q8NGA0 311 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 FERD3LQ96RJ6 166 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 TM9SF2Q99805 663 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 GSDMCQ9BYG8 508 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 SLITRK2Q9H156 845 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 DPAGT1Q9H3H5 408 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 ACTL8Q9H568 366 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 KCNK12Q9HB15 430 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 TAC3Q9UHF0 121 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PHF11Q9UIL8 331 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 PPT2Q9UMR5 302 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 ZNF780BQ9Y6R6 833 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 LOC102723532A0A0G2JNH3 316 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 A0A1W2PRU2 124 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 UPK1AO00322 258 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 SCAMP1O15126 338 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 LYRM1O43325 122 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 SOCS5O75159 536 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 OR12D1P0DN82 309 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 LAMP2P13473 410 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 JUNDP17535 347 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 CHMP24386 653 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 SLC19A1P41440 591 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 HBA1P69905 142 aa10.07□□□□□ -0.8
USB1-212ENST00000566082 HSF2Q03933 536 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms