RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TERF2Q15554 542 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ELAVL1Q15717 326 aaKnown RBP11.05□□□□□ -0.64
RAB5C-204ENST00000547517 MEP1AQ16819 746 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 CFAP157Q5JU67 520 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ACER2Q5QJU3 275 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 CISD2Q8N5K1 135 aaKnown RBP11.05□□□□□ -0.64
RAB5C-204ENST00000547517 NFAM1Q8NET5 270 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-204ENST00000547517 B3GNT7Q8NFL0 401 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 MYRIPQ8NFW9 859 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ELP5Q8TE02 316 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 AGAP11Q8TF27 550 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 SNRNP40Q96DI7 357 aaKnown RBP11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ZNF354BQ96LW1 612 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 KCNA7Q96RP8 456 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 NPAS2Q99743 824 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ALOXE3Q9BYJ1 711 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 SLC29A3Q9BZD2 475 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-204ENST00000547517 RPF2Q9H7B2 306 aaKnown RBP11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-204ENST00000547517 MKS1Q9NXB0 559 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 MS4A12Q9NXJ0 267 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ANKRD10Q9NXR5 420 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 PSD3Q9NYI0 1048 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 STMN3Q9NZ72 180 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 ABI3Q9P2A4 366 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 MID2Q9UJV3 735 aa11.05□□□□□ -0.64
RAB5C-204ENST00000547517 SYNDIG1LA6NDD5 238 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 GLOD5A6NK44 160 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 GABRR3A8MPY1 467 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 VPS4BO75351 444 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 SPAG7O75391 227 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 KRT6AP02538 564 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 KRT6BP04259 564 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 ENO1P06733 434 aaKnown RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 KLK1P06870 262 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 TLX1P31314 330 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 KRT6CP48668 564 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 NAGLUP54802 743 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 PKNOX1P55347 436 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 KCNC4Q03721 635 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 FOLH1Q04609 750 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 ZNF844Q08AG5 666 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 PCLAFQ15004 111 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 KRT71Q3SY84 523 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 MRM1Q6IN84 353 aaKnown RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 H3F3CQ6NXT2 135 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 FRMD7Q6ZUT3 714 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 PAGE2Q7Z2X7 111 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 COMMD6Q7Z4G1 85 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 C10orf107Q8IVU9 208 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 OR4N5Q8IXE1 308 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 METTL4Q8N3J2 472 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 BANPQ8N9N5 519 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 APCDD1LQ8NCL9 501 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 OR1N1Q8NGS0 311 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 METTL6Q8TCB7 284 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 THAP3Q8WTV1 239 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 SREK1Q8WXA9 508 aaKnown RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 HAS2Q92819 552 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 NCLNQ969V3 563 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 ANKRD9Q96BM1 317 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 C19orf60Q96EN9 201 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 VMP1Q96GC9 406 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 DGAT2Q96PD7 388 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 FAM111AQ96PZ2 611 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 RNF32Q9H0A6 362 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 CDCP1Q9H5V8 836 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 CLMPQ9H6B4 373 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 BRF2Q9HAW0 419 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 MID1IP1Q9NPA3 183 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 ASF1BQ9NVP2 202 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 TEX10Q9NXF1 929 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 AHSPQ9NZD4 102 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 ZNF223Q9UK11 482 aaPredicted RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 VPS4AQ9UN37 437 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 ASB4Q9Y574 426 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 TIMM22Q9Y584 194 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 CLCA3PQ9Y6N3 262 aa11.04□□□□□ -0.64
RAB5C-204ENST00000547517 HELZ2Q9BYK8 2649 aaKnown RBP11.04□□□□□ -0.64
RAB5C-204ENST00000547517 TRAV17A0A0B4J275 112 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 A0A1W2PR48 441 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 C17orf105B2RV13 164 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 UBFD1O14562 309 aaKnown RBP11.03□□□□□ -0.64
RAB5C-204ENST00000547517 PROM1O43490 865 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 CRCPO75575 148 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 ESRRBO95718 433 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 CHN1P15882 459 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 TNNI3P19429 210 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 TPP2P29144 1249 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-204ENST00000547517 UQCRFS1P47985 274 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 CLCN2P51788 898 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 MAPK12P53778 367 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 FOXA1P55317 472 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 DNAJB13P59910 316 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 PLIN5Q00G26 463 aa11.03□□□□□ -0.64
RAB5C-204ENST00000547517 OC90Q02509 493 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-204ENST00000547517 GALNT1Q10472 559 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-204ENST00000547517 TBL3Q12788 808 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms