RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TFECO14948 347 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 CTNSO60931 367 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 SH3BGRLO75368 114 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 ZWINTO95229 277 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 MTHFD2P13995 350 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 ZNF10P21506 573 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 CASQ1P31415 396 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 MSH2P43246 934 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 MEOX1P50221 254 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 NR0B1P51843 470 aaKnown RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 ETF1P62495 437 aaKnown RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 FOLH1Q04609 750 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 MYBPHQ13203 477 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 LAPTM5Q13571 262 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 SLMAPQ14BN4 828 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 SYT10Q6XYQ8 523 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 RAPH1Q70E73 1250 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 LRRC70Q7Z2Q7 622 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 CYP4Z2PQ8N1L4 340 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 RNF175Q8N4F7 328 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 ZNF321PQ8N8H1 164 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 STAG3L4Q8TBR4 150 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 ZNF473Q8WTR7 871 aaKnown RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 PTPMT1Q8WUK0 201 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 SREK1Q8WXA9 508 aaKnown RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 RND1Q92730 232 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 NINJ1Q92982 152 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 TMEM125Q96AQ2 219 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 NXNL1Q96CM4 212 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 MAPKAP1Q9BPZ7 522 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 ADAP2Q9NPF8 381 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 NUDT4Q9NZJ9 180 aa11.01□□□□□ -0.65
GABPB1-206ENST00000543881 MAP1AP78559 2803 aaPredicted RBP11.01□□□□□ -0.65
GABPB1-206ENST00000543881 ESYT3A0FGR9 886 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 HMX2A2RU54 273 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 PEX1O43933 1283 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 CDC40O60508 579 aaKnown RBP eCLIP11□□□□□ -0.65
GABPB1-206ENST00000543881 KERAO60938 352 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 LDB3O75112 727 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 ZFAND5O76080 213 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 TGFB1P01137 390 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 S100BP04271 92 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 LTA4HP09960 611 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 ATP5A1P25705 553 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 GPR85P60893 370 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 IRF9Q00978 393 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 SLC7A5Q01650 507 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 CAV1Q03135 178 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 PCDH1Q08174 1060 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 ELAVL1Q15717 326 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 PAGE2BQ5JRK9 111 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 UBAP2Q5T6F2 1119 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 ZNF572Q7Z3I7 529 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 CCDC71Q8IV32 467 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 LAS2Q8IYD9 372 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 CENPLQ8N0S6 344 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 TMEM156Q8N614 296 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 ACOT4Q8N9L9 421 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 POGLUT1Q8NBL1 392 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 OR7G3Q8NG95 312 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 UBTD2Q8WUN7 234 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 KCTD4Q8WVF5 259 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 KCNC2Q96PR1 638 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 ALOXE3Q9BYJ1 711 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 RAB17Q9H0T7 212 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 TP63Q9H3D4 680 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 COPS7BQ9H9Q2 264 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 NMRAL1Q9HBL8 299 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 SLC24A3Q9HC58 644 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 LYRM4Q9HD34 91 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 DEPPQ9NTK1 212 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 DNAJB12Q9NXW2 375 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 VTI1BQ9UEU0 232 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 MRPS33Q9Y291 106 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 KLF13Q9Y2Y9 288 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 YARS2Q9Y2Z4 477 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 PHF3Q92576 2039 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 PINLYPA6NC86 204 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 LRRC14BA6NHZ5 514 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 SUPT3HB4E1H0 165 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 K7EPI3 171 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 SAP18O00422 153 aaKnown RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 HS6ST1O60243 411 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 ZNF354AO60765 605 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 SUPT3HO75486 399 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 OR2J2O76002 312 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 OR6B1O95007 311 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 IFNA16P05015 189 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 PCNAP12004 261 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 HIST1H1TP22492 207 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 CRABP2P29373 138 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 HPDP32754 393 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 STX2P32856 288 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 SSR4P51571 173 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 ID2Q02363 134 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 FOXD4Q12950 439 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 BMPR2Q13873 1038 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 CEBPEQ15744 281 aa11□□□□□ -0.65
GABPB1-206ENST00000543881 HIST2H2ACQ16777 129 aaPredicted RBP11□□□□□ -0.65
GABPB1-206ENST00000543881 CMPK2Q5EBM0 449 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms