RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CBSP35520 551 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 HK3P52790 923 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 GAS6Q14393 721 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 LRIT3Q3SXY7 679 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 TMCO2Q7Z6W1 182 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ASB15Q8WXK1 588 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 HERVK_113Q902F9 699 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 SLC45A3Q96JT2 553 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 DPYSL5Q9BPU6 564 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 EFCAB11Q9BUY7 163 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ABCG5Q9H222 651 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 WDR26Q9H7D7 661 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 FBRSQ9HAH7 460 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ERVW-1Q9UQF0 538 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 RBM47A0AV96 593 aaKnown RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 ZNF860A6NHJ4 632 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 NUAK1O60285 661 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 THEGLP0DJG4 465 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 OXTRP30559 389 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ACTR1BP42025 376 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ACTR1AP61163 376 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 NIPAL4Q0D2K0 466 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 AADACL4Q5VUY2 407 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 CARD17Q5XLA6 110 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 CDCA2Q69YH5 1023 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 TSPEARQ8WU66 669 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 SCLYQ96I15 445 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 PFDN5Q99471 154 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ASF1BQ9NVP2 202 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 A0A1B0GVC2 190 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 A0A1W2PQL4 384 aaPredicted RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 LAG3P18627 525 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 UQCRC2P22695 453 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 TMEM107Q6UX40 140 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 TMIGD1Q6UXZ0 262 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 TMPRSS12Q86WS5 348 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 SIX4Q9UIU6 781 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 NME4O00746 187 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 RBBP9O75884 186 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 OAS1P00973 400 aaKnown RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 SH3BP2P78314 561 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 C2orf27AQ580R0 203 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 ZSWIM9Q86XI8 627 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 FTMTQ8N4E7 242 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 MAPK15Q8TD08 544 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 FAM46AQ96IP4 442 aaKnown RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 LRR1Q96L50 414 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 MTG2Q9H4K7 406 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 UNC119BA6NIH7 251 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 A6NIN4 97 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 PRICKLE3O43900 615 aaPredicted RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 FGF19O95750 216 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 C8AP07357 584 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 SLC6A6P31641 620 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 SNU13P55769 128 aaKnown RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 ERVK-25P63136 954 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 FGFBP1Q14512 234 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 SIX1Q15475 284 aaPredicted RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 SPHARQ15513 63 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 HES5Q5TA89 166 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 DUS1LQ6P1R4 473 aaKnown RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 OR52B6Q8NGF0 335 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 LMO3Q8TAP4 145 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 HEBP2Q9Y5Z4 205 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 H7BY64 318 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 ZNF821O75541 412 aaPredicted RBP11.57□□□□□ -0.56
UBR4-205ENST00000417040 UPK1BO75841 260 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 FHP07954 510 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 PPP5CP53041 499 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 TRAM2Q15035 370 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 ATG9BQ674R7 924 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 ZNF599Q96NL3 588 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 PRAP1Q96NZ9 151 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 HERPUD2Q9BSE4 406 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 PRDM9Q9NQV7 894 aa11.57□□□□□ -0.56
UBR4-205ENST00000417040 ACRP10323 421 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 PTPN2P17706 415 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 GGT1P19440 569 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 ZNF763Q0D2J5 394 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 NNATQ16517 81 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 KANK2Q63ZY3 851 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 TLDC1Q6P9B6 456 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 UGT2A3Q6UWM9 527 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 KBTBD6Q86V97 674 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 BEST3Q8N1M1 668 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 SLC44A3Q8N4M1 653 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.56□□□□□ -0.562e-7■■■■□ 24.1
UBR4-205ENST00000417040 HMGB4Q8WW32 186 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 AIG1Q9NVV5 245 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 GPRC5BQ9NZH0 403 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 PCDHGB6Q9Y5F9 930 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 A0A0U1RQS6 177 aa11.56□□□□□ -0.56
UBR4-205ENST00000417040 UBFD1O14562 309 aaKnown RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 ERP29P30040 261 aaKnown RBP11.56□□□□□ -0.56
UBR4-205ENST00000417040 CRISP1P54107 249 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms