RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 DUOXA1Q1HG43 343 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 COX20Q5RI15 118 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 TUBA3EQ6PEY2 450 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 ALKAL2Q6UX46 152 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 ZNF730Q6ZMV8 503 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 KLBQ86Z14 1044 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 GALNT13Q8IUC8 556 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 FTMTQ8N4E7 242 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 TEX47Q8TBZ9 253 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 SLC5A11Q8WWX8 675 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 AUTS2Q8WXX7 1259 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 FCGR1BQ92637 280 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 REPS1Q96D71 796 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 MACROD1Q9BQ69 325 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 SPATA9Q9BWV2 254 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.44□□□□□ -1.06
RTN4-206ENST00000394611 POT1Q9NUX5 634 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 CNIH4Q9P003 139 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 VPS29Q9UBQ0 182 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 TMEFF2Q9UIK5 374 aaPredicted RBP8.44□□□□□ -1.06
RTN4-206ENST00000394611 ARHGEF33A8MVX0 844 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 UPK1AO00322 258 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 PRICKLE3O43900 615 aaPredicted RBP8.44□□□□□ -1.06
RTN4-206ENST00000394611 GPR32O75388 356 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 FGF4P08620 206 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 DNASE1P24855 282 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 PTGER3P43115 390 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 IL10RBQ08334 325 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 NFE2Q16621 373 aaPredicted RBP8.44□□□□□ -1.06
RTN4-206ENST00000394611 MACC1Q6ZN28 852 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 ESPNLQ6ZVH7 1005 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 ZNF551Q7Z340 670 aaPredicted RBP8.44□□□□□ -1.06
RTN4-206ENST00000394611 OR6F1Q8NGZ6 308 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 OR52P1PQ8NH57 321 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.44□□□□□ -1.063e-47■□□□□ 9.6
RTN4-206ENST00000394611 BBS4Q96RK4 519 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 TEX12Q9BXU0 123 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 CD244Q9BZW8 370 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 QRSL1Q9H0R6 528 aaKnown RBP8.44□□□□□ -1.06
RTN4-206ENST00000394611 MTG2Q9H4K7 406 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 OR6C2Q9NZP2 312 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 TBC1D24Q9ULP9 559 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 DYRK1BQ9Y463 629 aa8.44□□□□□ -1.06
RTN4-206ENST00000394611 LGALS8O00214 317 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 HRO43593 1189 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 PAHP00439 452 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 RD3LP0DJH9 198 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ITGA1P56199 1179 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 P2RY14Q15391 338 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 FCN2Q15485 313 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 TAF1AQ15573 450 aaPredicted RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 ELP2Q6IA86 826 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 RBM45Q8IUH3 476 aaKnown RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 FAM46DQ8NEK8 389 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 SLC7A6Q92536 515 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 TRIM43Q96BQ3 446 aaPredicted RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 IL17FQ96PD4 163 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ZNF69Q9UC07 566 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 LYRM1O43325 122 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 SOX30O94993 753 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ALX3O95076 343 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 HPRP00739 348 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 IFNA14P01570 189 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CDK1P06493 297 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 HLA-EP13747 358 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 GRPRP30550 384 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 AIF1P55008 147 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CLDN8P56748 225 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CRYZQ08257 329 aaKnown RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 SERINC3Q13530 473 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 GPR19Q15760 415 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 KANSL1Q7Z3B3 1105 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 VWA5B2Q8N398 1253 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 DNAJC22Q8N4W6 341 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 DPP10Q8N608 796 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 USP7Q93009 1102 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ISL2Q96A47 359 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 FUZQ9BT04 418 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ELOVL2Q9NXB9 296 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 TRPM5Q9NZQ8 1165 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 RWDD3Q9Y3V2 267 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 PCDHGA6Q9Y5G7 932 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ATG2BQ96BY7 2078 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 MEIS3P1A6NDR6 274 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 M0R082 166 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 REM1O75628 298 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 UCHL1P09936 223 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 ATXN1LP0C7T5 689 aaKnown RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 HOXB8P17481 243 aaPredicted RBP8.43□□□□□ -1.06
RTN4-206ENST00000394611 CLCN4P51793 760 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CLCN7P51798 805 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 AKR1C2P52895 323 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 AKR1C1Q04828 323 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CACNG1Q06432 222 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 FAPQ12884 760 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 CTSL3PQ5NE16 218 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 NDUFAF5Q5TEU4 345 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 HIST2H2AA3Q6FI13 130 aa8.43□□□□□ -1.06
RTN4-206ENST00000394611 POMZP3Q6PJE2 187 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms