RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ELK4P28324 431 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 ERVK-8P63133 956 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 RHDQ02161 417 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 NCEH1Q6PIU2 408 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 PROKR1Q8TCW9 393 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 ROPN1LQ96C74 230 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 GPR88Q9GZN0 384 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 MTMR10Q9NXD2 777 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 B3GNT2Q9NY97 397 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 HEPACAM2A8MVW5 462 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 PRICKLE3O43900 615 aaPredicted RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 RPS17P08708 135 aaKnown RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 SOX3P41225 446 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 C2orf76Q3KRA6 126 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 C6orf183Q5T699 404 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 BRAT1Q6PJG6 821 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 APEHP13798 732 aaKnown RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 AK4P27144 223 aaPredicted RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 GNMTQ14749 295 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 NSDHLQ15738 373 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.69■□□□□ 0.1
RGP1-201ENST00000378078 ACTL8Q9H568 366 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 SERTAD4Q9NUC0 356 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 TAS2R10Q9NYW0 307 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 H3BQ06 376 aaPredicted RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 CASC3O15234 703 aaKnown RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 FBXL8Q96CD0 374 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 RBM24Q9BX46 236 aaKnown RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 CWH43Q9H720 699 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 EEF1E1O43324 174 aaKnown RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 ASGR2P07307 311 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 SYPP08247 313 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 FXNQ16595 210 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 TMEM69Q5SWH9 247 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 OR9I1Q8NGQ6 314 aa15.69■□□□□ 0.1
RGP1-201ENST00000378078 TFB2MQ9H5Q4 396 aaKnown RBP15.69■□□□□ 0.1
RGP1-201ENST00000378078 BEST1O76090 585 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 CRISP1P54107 249 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 AWAT2Q6E213 333 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 FBXL20Q96IG2 436 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 OR5B2Q96R09 309 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 MCHR1Q99705 422 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 PCTPQ9UKL6 214 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 PTGDR2Q9Y5Y4 395 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 MEIS3P1A6NDR6 274 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 ANKRD66B4E2M5 251 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 HMGN1P05114 100 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 CKMT2P17540 419 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 MAP2K4P45985 399 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 ZXDBP98169 803 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 MS4A13Q5J8X5 152 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 FITM2Q8N6M3 262 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 SCAMP4Q969E2 229 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 A8MVJ9 347 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 LUMP51884 338 aaPredicted RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 ZNF423Q2M1K9 1284 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 LIPKQ5VXJ0 399 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 DPY19L3Q6ZPD9 716 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 ANKK1Q8NFD2 765 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 CAMK1GQ96NX5 476 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 BTNL10A8MVZ5 291 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 TP53I11O14683 189 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 S1PR1P21453 382 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 SLC6A4P31645 630 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 VIPR2P41587 438 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 DUSP3P51452 185 aaPredicted RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 ZNF136P52737 540 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 HNRNPDQ14103 355 aaKnown RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 ZNF610Q8N9Z0 462 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 ZC3HAV1LQ96H79 300 aaKnown RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 MUC13Q9H3R2 512 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 UBE2J1Q9Y385 318 aaPredicted RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 ROBO1Q9Y6N7 1651 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 C2orf78A6NCI8 922 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 SLC1A7O00341 560 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 KDELR3O43731 214 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 HTR3BO95264 441 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 AGR2O95994 175 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 CRYZQ08257 329 aaKnown RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 AGTRAPQ6RW13 159 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 ZNF584Q8IVC4 421 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 ALDH16A1Q8IZ83 802 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 TMEM130Q8N3G9 435 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 VGLL2Q8N8G2 317 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 NAA11Q9BSU3 229 aaPredicted RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 RGCCQ9H4X1 137 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 GNB4Q9HAV0 340 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 TM9SF3Q9HD45 589 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 PRMT8Q9NR22 394 aaPredicted RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 RNF215Q9Y6U7 377 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 OR6C6A6NF89 314 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 COCHO43405 550 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 POLR2HP52434 150 aaKnown RBP15.68■□□□□ 0.1
RGP1-201ENST00000378078 CASP7P55210 303 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 SLC18A2Q05940 514 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 PPP1R3AQ16821 1122 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 VMACQ2NL98 169 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 RELL1Q8IUW5 271 aa15.68■□□□□ 0.1
RGP1-201ENST00000378078 SMPDL3AQ92484 453 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms