RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TIMM22Q9Y584 194 aa16.79■□□□□ 0.28
SNRPA1-201ENST00000254193 PCDHGA10Q9Y5H3 936 aa16.79■□□□□ 0.28
SNRPA1-201ENST00000254193 BSNQ9UPA5 3926 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 PROM1O43490 865 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 FGF17O60258 216 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 ESRRBO95718 433 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 KRT6AP02538 564 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 KRT6BP04259 564 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 TUBBP07437 444 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 CHN1P15882 459 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 HMOX2P30519 316 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 KRT6CP48668 564 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 HTR6P50406 440 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 PKNOX1P55347 436 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 TAS2R50P59544 299 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 ZNF844Q08AG5 666 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 ZNF169Q14929 603 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 TERF2Q15554 542 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 BEST3Q8N1M1 668 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 METTL4Q8N3J2 472 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 SLC5A8Q8N695 610 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 B3GNT7Q8NFL0 401 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 OR1N1Q8NGS0 311 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 AGAP11Q8TF27 550 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 UCN3Q969E3 161 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 CDCP1Q9H5V8 836 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 MID1IP1Q9NPA3 183 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 ADAP2Q9NPF8 381 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 MKS1Q9NXB0 559 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 AHSPQ9NZD4 102 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 MAP10Q9P2G4 905 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 STK38LQ9Y2H1 464 aa16.78■□□□□ 0.28
SNRPA1-201ENST00000254193 BLACEA4D250 179 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 GLOD5A6NK44 160 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 ULK1O75385 1050 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 AIFM1O95831 613 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 CREB1P16220 341 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 TPP2P29144 1249 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 TLX1P31314 330 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 BUD31P41223 144 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 TNFSF10P50591 281 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 GPR143P51810 404 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 GALNT1Q10472 559 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 TBL3Q12788 808 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 SERTAD2Q14140 314 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 ELAVL1Q15717 326 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 MEP1AQ16819 746 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 KRT71Q3SY84 523 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 CFAP157Q5JU67 520 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 CCNYL2Q5T2Q4 361 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 FRMD7Q6ZUT3 714 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 COMMD6Q7Z4G1 85 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 APCDD1LQ8NCL9 501 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 PTPMT1Q8WUK0 201 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 TANKQ92844 425 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 NCLNQ969V3 563 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 SNRNP40Q96DI7 357 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 FAM111AQ96PZ2 611 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 RNF32Q9H0A6 362 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 BRF2Q9HAW0 419 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 SLC17A7Q9P2U7 560 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 ADAM29Q9UKF5 820 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 CLCA3PQ9Y6N3 262 aa16.77■□□□□ 0.28
SNRPA1-201ENST00000254193 HELZ2Q9BYK8 2649 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 TRBV11-1A0A0K0K1C0 115 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 ENO1P06733 434 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 NR2F6P10588 404 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 TNNI3P19429 210 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 FOXA1P55317 472 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 KCNC4Q03721 635 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 FOLH1Q04609 750 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 PCLAFQ15004 111 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 LIPMQ5VYY2 423 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 SCIMPQ6UWF3 145 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 PAGE2Q7Z2X7 111 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 RPS19BP1Q86WX3 136 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 SREK1Q8WXA9 508 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 PPWD1Q96BP3 646 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 SMC6Q96SB8 1091 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 DEFB126Q9BYW3 111 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 SHCBP1LQ9BZQ2 653 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 ASF1BQ9NVP2 202 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 NMRK1Q9NWW6 199 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 TEX10Q9NXF1 929 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 ANKRD10Q9NXR5 420 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 VPS29Q9UBQ0 182 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 MID2Q9UJV3 735 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 ZNF223Q9UK11 482 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 PPIEQ9UNP9 301 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 NTNG1Q9Y2I2 539 aa16.76■□□□□ 0.27
SNRPA1-201ENST00000254193 TRAV17A0A0B4J275 112 aa16.75■□□□□ 0.27
SNRPA1-201ENST00000254193 ARHGAP10A1A4S6 786 aa16.75■□□□□ 0.27
SNRPA1-201ENST00000254193 OR5H15A6NDH6 313 aa16.75■□□□□ 0.27
SNRPA1-201ENST00000254193 C17orf105B2RV13 164 aa16.75■□□□□ 0.27
SNRPA1-201ENST00000254193 CD96P40200 585 aa16.75■□□□□ 0.27
SNRPA1-201ENST00000254193 CLCN2P51788 898 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms