RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PAMR1Q6UXH9 720 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 SERPINA13PQ6UXR4 307 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 LACC1Q8IV20 430 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 APCDD1Q8J025 514 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 KLHL36Q8N4N3 616 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 CELF5Q8N6W0 485 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 COQ8BQ96D53 544 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 ABCG5Q9H222 651 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 IMP3Q9NV31 184 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 DAPL1A0PJW8 107 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 GABRR3A8MPY1 467 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RTCAO00442 366 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 RLN1P04808 185 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 IL3P08700 152 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RHCEP18577 417 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 MC1RQ01726 317 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RBBP4Q09028 425 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RPA4Q13156 261 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 FRMPD2BQ6IN97 320 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RD3Q7Z3Z2 195 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 FAM20CQ8IXL6 584 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 AUTS2Q8WXX7 1259 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 HRASLS5Q96KN8 279 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 NIPSNAP1Q9BPW8 284 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RDH8Q9NYR8 311 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 MAT2BQ9NZL9 334 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 FBXW2Q9UKT8 454 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 COL5A3P25940 1745 aaPredicted RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 ZFC3H1O60293 1989 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 ZNF840PA6NDX5 716 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CD8B2A6NJW9 211 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 FAM170BA6NMN3 283 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TNFRSF10BO14763 440 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TAPBPO15533 448 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CYP17A1P05093 508 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 RB1P06400 928 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLC35G4P0C7Q5 338 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CD8BP10966 210 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ACSL1P33121 698 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CRISP3P54108 245 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CAV3P56539 151 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLC3A1Q07837 685 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 RTP2Q5QGT7 225 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 C1QTNF12Q5T7M4 302 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TMIGD1Q6UXZ0 262 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 LINC00299Q6ZSB3 139 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 MEX3DQ86XN8 651 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 SAMD12Q8N8I0 201 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PJA1Q8NG27 643 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CIDECQ96AQ7 238 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 PPIL3Q9H2H8 161 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 RPS6KB2Q9UBS0 482 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ZFR2Q9UPR6 939 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 YIPF1Q9Y548 306 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 NOX1Q9Y5S8 564 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PHIPQ8WWQ0 1821 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SH3D21A4FU49 640 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 FAM86C2PA6NEL3 165 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 HMX3A6NHT5 357 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 GLOD5A6NK44 160 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PLD2O14939 933 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 MID1O15344 667 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PI15O43692 258 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 AOC2O75106 756 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLC16A8O95907 504 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SPNP16150 400 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 CCR7P32248 378 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 PNLIPRP1P54315 467 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 FADDQ13158 208 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 COL9A2Q14055 689 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 CBX2Q14781 532 aaPredicted RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 TOMM5Q8N4H5 51 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 GPR26Q8NDV2 337 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 OR6C4Q8NGE1 309 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 AKAP1Q92667 903 aaKnown RBP eCLIP10.08□□□□□ -0.8
USB1-212ENST00000566082 NEDD4LQ96PU5 975 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 FYTTD1Q96QD9 318 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 P2RY13Q9BPV8 354 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TNFRSF10DQ9UBN6 386 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 UBE2QL1A1L167 161 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 FAM227AF5H4B4 570 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 STOMP27105 288 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 GJA5P36382 358 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 RPL4P36578 427 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 PPP3R1P63098 170 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TGM3Q08188 693 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 IKBIPQ70UQ0 350 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ADGRD2Q7Z7M1 963 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 OR7G3Q8NG95 312 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SETD6Q8TBK2 473 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TESCQ96BS2 214 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 ZNF558Q96NG5 402 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TRIB3Q96RU7 358 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 TTLL2Q9BWV7 592 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLC12A9Q9BXP2 914 aa10.08□□□□□ -0.8
USB1-212ENST00000566082 SLIRPQ9GZT3 109 aaKnown RBP10.08□□□□□ -0.8
USB1-212ENST00000566082 C5AR2Q9P296 337 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms