RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 GPNMBQ14956 572 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 CCDC58Q4VC31 144 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 FLYWCH1Q4VC44 716 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 LYPD8Q6UX82 237 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 Q6ZNB5 142 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 COMMD6Q7Z4G1 85 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 LSRQ86X29 649 aaPredicted RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 IFNL1Q8IU54 200 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 RBM45Q8IUH3 476 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 CHST14Q8NCH0 376 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 SLC7A6Q92536 515 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 NECTIN4Q96NY8 510 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 POLR2J2Q9GZM3 115 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 SPNS1Q9H2V7 528 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 REEP4Q9H6H4 257 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 REV1Q9UBZ9 1251 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 CMAHPQ9Y471 501 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 KIF26AQ9ULI4 1882 aaPredicted RBP11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 DSPPQ9NZW4 1301 aa11.2□□□□□ -0.62
PDZRN3-203ENST00000462146 HMX3A6NHT5 357 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF670-ZNF695F2Z2N8 137 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 KPNA5O15131 536 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 SLC16A5O15375 505 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 TSPAN6O43657 245 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 APOL3O95236 402 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PBLDP30039 288 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CSTF2P33240 577 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 HMGA2P52926 109 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CTSCP53634 463 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CYP4F8P98187 520 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 RHAGQ02094 409 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 FCHO2Q0JRZ9 810 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 C2orf80Q0P641 193 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 HNRNPA0Q13151 305 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 VEPH1Q14D04 833 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 LARS2Q15031 903 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PAMR1Q6UXH9 720 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 UBASH3BQ8TF42 649 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 BHLHE41Q9C0J9 482 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 BRF2Q9HAW0 419 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 DNMT3AQ9Y6K1 912 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 FADS2P1A8MWK0 482 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 H3BN98 237 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 NRG2O14511 850 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 TPST2O60704 377 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PLXNA2O75051 1894 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 FURINP09958 794 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 MSL3P1P0C860 447 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PSMA1P25786 263 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PDHA2P29803 388 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CAV3P56539 151 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PCBP3P57721 371 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF91Q05481 1191 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF763Q0D2J5 394 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 GLYR1Q49A26 553 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 SPIN4Q56A73 249 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CRB2Q5IJ48 1285 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 C22orf42Q6IC83 251 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 DPY19L3Q6ZPD9 716 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 HSD11B1LQ7Z5J1 315 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 TCEANCQ8N8B7 351 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 SYT14Q8NB59 555 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 OR9Q1Q8NGQ5 310 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 GOT1L1Q8NHS2 421 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 ECHDC3Q96DC8 303 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 RC3H2Q9HBD1 1191 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 FZD3Q9NPG1 666 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 STUB1Q9UNE7 303 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 A8MVJ9 347 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 B4DXG7 233 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PSIP1O75475 530 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CHRNB1P11230 501 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 TAS2R50P59544 299 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 LRRC74AQ0VAA2 488 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 ELAVL2Q12926 359 aaKnown RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 GPAT3Q53EU6 434 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 MPPE1Q53F39 396 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CEACAM20Q6UY09 585 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CCDC149Q6ZUS6 474 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 DNAJB7Q7Z6W7 309 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 NOXA1Q86UR1 476 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 KRT73Q86Y46 540 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 RASGRP3Q8IV61 690 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PHC2Q8IXK0 858 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CAMKK1Q8N5S9 505 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 TMEM80Q96HE8 168 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 C19orf43Q9BQ61 176 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 TSSK6Q9BXA6 273 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 TMEM38AQ9H6F2 299 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 ATP6V1HQ9UI12 483 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 CARD8Q9Y2G2 431 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 GPSM3Q9Y4H4 160 aa11.19□□□□□ -0.62
PDZRN3-203ENST00000462146 A0A1W2PQL4 384 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 HYKKA2RU49 373 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 HEPACAM2A8MVW5 462 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 CENPBD1B2RD01 187 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms