RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 LRP3O75074 770 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 DUSP14O95147 198 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 PENKP01210 267 aaPredicted RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 MMP10P09238 476 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 CTNNA2P26232 953 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 CDH13P55290 713 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 KRTAP12-4P60329 112 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 EIF4EBP1Q13541 118 aaPredicted RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 ECSCRQ19T08 205 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 IGSF11Q5DX21 431 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 ZNF781Q8N8C0 355 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 VN1R17PQ8TDU5 208 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 KCNE4Q8WWG9 221 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 DEDD2Q8WXF8 326 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 ST6GALNAC6Q969X2 333 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 SNRNP40Q96DI7 357 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 FAM120BQ96EK7 910 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 SGF29Q96ES7 293 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 RSRC1Q96IZ7 334 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 GDAP1L1Q96MZ0 367 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 TNFRSF13CQ96RJ3 184 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 TBX15Q96SF7 602 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 ZNF184Q99676 751 aaPredicted RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 NACAP1Q9BZK3 213 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 SNX25Q9H3E2 840 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 SLC35C2Q9NQQ7 365 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 PRMT7Q9NVM4 692 aaPredicted RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 AASSQ9UDR5 926 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 FAT4Q6V0I7 4981 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 ARAP3Q8WWN8 1544 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 CCDC88BA6NC98 1476 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 PLA2R1Q13018 1463 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 UHRF1BP1Q6BDS2 1440 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 IGKV2D-24A0A075B6R9 120 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 EEF2KO00418 725 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 ACTL6AO96019 429 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 ACP1P24666 158 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 PMELP40967 661 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 PAX2Q02962 417 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 BECN1Q14457 450 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 NONOQ15233 471 aaKnown RBP eCLIP0.7□□□□□ -2.3
CEP290-208ENST00000604024 VWC2Q2TAL6 325 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 ZNF658Q5TYW1 1059 aaPredicted RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 ABRAXAS1Q6UWZ7 409 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 GCNT7Q6ZNI0 430 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 TRMT11Q7Z4G4 463 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 PHLDB2Q86SQ0 1253 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 AMIGO1Q86WK6 493 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 SAMD12Q8N8I0 201 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 GRK7Q8WTQ7 553 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 SNRNP27Q8WVK2 155 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 C16orf74Q96GX8 76 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 ZNF830Q96NB3 372 aaPredicted RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 OR5M11Q96RB7 305 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 C19orf24Q9BVV8 132 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 DPEP3Q9H4B8 488 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 SEPT11Q9NVA2 429 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 SLCO1B1Q9Y6L6 691 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 FANCAO15360 1455 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 CFTRP13569 1480 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 GRIN2BQ13224 1484 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 TCOF1Q13428 1488 aaKnown RBP0.7□□□□□ -2.3
CEP290-208ENST00000604024 LRRC9Q6ZRR7 1453 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 MAGI2Q86UL8 1455 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 WDR7Q9Y4E6 1490 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 CHD1O14646 1710 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 FGD6Q6ZV73 1430 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 NWD1Q149M9 1564 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 PGPEP1LA6NFU8 196 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 J3KRW8 73 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 CCSO14618 274 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 STBD1O95210 358 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 LUC7L3O95232 432 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 TBX18O95935 607 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 F3P13726 295 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 HSPA1LP34931 641 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 PPOXP50336 477 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 CLNS1AP54105 237 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 GNB2P62879 340 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 ORC2Q13416 577 aaPredicted RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 ZNF691Q5VV52 312 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 TTC27Q6P3X3 843 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 TFAP2EQ6VUC0 442 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 DNAAF5Q86Y56 855 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 ZNF595Q8IYB9 648 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 TMEM99Q8N816 258 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 LRTM2Q8N967 370 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 CAMKVQ8NCB2 501 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 NXPE2Q96DL1 559 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 TECTBQ96PL2 329 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 C19orf43Q9BQ61 176 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 CHRDL1Q9BU40 450 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 APOBEC3BQ9UH17 382 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 UHRF1BP1LA0JNW5 1464 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 PREX1Q8TCU6 1659 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 PTCH1Q13635 1447 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 FAM135BQ49AJ0 1406 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 CNTLNQ9NXG0 1405 aa0.69□□□□□ -2.3
CEP290-208ENST00000604024 EIF4G3O43432 1585 aaKnown RBP0.69□□□□□ -2.3
CEP290-208ENST00000604024 FRG2CA6NGY1 282 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms